RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 RNASE9P60153 205 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 ST8SIA6P61647 398 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 FAM193AP78312 1265 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 CDK17Q00537 523 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 PTK2Q05397 1052 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 NME3Q13232 169 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 E2F5Q15329 346 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 PTPN20Q4JDL3 420 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 VWA3BQ502W6 1294 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 PITRM1Q5JRX3 1037 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 MIIPQ5JXC2 388 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 MPP7Q5T2T1 576 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 GANCQ8TET4 914 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 MYO19Q96H55 970 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 RPL10LQ96L21 214 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 FAM81BQ96LP2 452 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 CAMK1GQ96NX5 476 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 TUBGCP2Q9BSJ2 902 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 NUP58Q9BVL2 599 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 SYNCQ9H7C4 482 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 DDIT4Q9NX09 232 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 SLCO3A1Q9UIG8 710 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 FHOD1Q9Y613 1164 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 PCNX2A6NKB5 2137 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 USP24Q9UPU5 2620 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 A0A1B0GTW7 788 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 FAM47DPA6NHR8 397 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 SIN3BO75182 1162 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 FSBPO95073 299 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 LUC7L3O95232 432 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 IGLV3-25P01717 112 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 DNTTP04053 509 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 SYPP08247 313 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 CEACAM1P13688 526 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 CD59P13987 128 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 PDGFRAP16234 1089 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 STK19P49842 368 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 IRAK1P51617 712 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 SIM1P81133 766 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 CENPCQ03188 943 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 GRIK2Q13002 908 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 SEMA3BQ13214 749 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 NNTQ13423 1086 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 KCNJ12Q14500 433 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 MEA1Q16626 185 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 C2CD6Q53TS8 623 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 EFHC1Q5JVL4 640 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 DPY19L2P1Q6NXN4 242 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 LAYNQ6UX15 382 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 C11orf57Q6ZUT1 292 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 RABEPKQ7Z6M1 372 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 PIP4P1Q86T03 277 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 FAM114A1Q8IWE2 563 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 ATP6V0D2Q8N8Y2 350 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 DNASE2BQ8WZ79 361 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 TTC17Q96AE7 1141 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 MRGPRX3Q96LB0 322 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 SLC32A1Q9H598 525 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 IL21RQ9HBE5 538 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 TAB2Q9NYJ8 693 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 SUSD2Q9UGT4 822 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 PCDHGC3Q9UN70 934 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 ERVW-1Q9UQF0 538 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 SNX10Q9Y5X0 201 aa12.64□□□□□ -0.39
GTF3C1-208ENST00000567843 CKAP5Q14008 2032 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 A0A1B0GVT2 93 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 GTPBP10A4D1E9 387 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 KCNU1A8MYU2 1149 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 F5H5T6 163 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 KCNK3O14649 394 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 SH3BP5O60239 455 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 IGLV3-19P01714 112 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 TFE3P19532 575 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 MZF1P28698 734 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 CSNK1EP49674 416 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 BNC1Q01954 994 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 DRAP1Q14919 205 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 ST3GAL2Q16842 350 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 ZNF776Q68DI1 518 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 OLFML1Q6UWY5 402 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 BEND5Q7L4P6 421 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 C14orf80Q86SX3 495 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 MMAAQ8IVH4 418 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 CCAR2Q8N163 923 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 CADM4Q8NFZ8 388 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 IGSF8Q969P0 613 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 BTN2A3PQ96KV6 586 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 NOX5Q96PH1 765 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 SLC2A13Q96QE2 648 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 TRIM62Q9BVG3 475 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 BTBD1Q9H0C5 482 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 LMBRD1Q9NUN5 540 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 KIAA1522Q9P206 1035 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 SERGEFQ9UGK8 458 aa12.63□□□□□ -0.39
GTF3C1-208ENST00000567843 SLC12A6Q9UHW9 1150 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms