RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 RABEPKQ7Z6M1 372 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 ERICH1Q86X53 443 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 ZDHHC17Q8IUH5 632 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 CARNMT1Q8N4J0 409 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 TMEM35BQ8NCS4 154 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 ANKRD20A12PQ8NF67 263 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 ZNF397Q8NF99 534 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 WFDC5Q8TCV5 224 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 FOXJ1Q92949 421 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 C18orf8Q96DM3 657 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 MYEOVQ96EZ4 313 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 ZNF419Q96HQ0 510 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 NUP58Q9BVL2 599 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 MKRN2Q9H000 416 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 NUCKS1Q9H1E3 243 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 TMEM245Q9H330 911 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 FAM204AQ9H8W3 233 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 FBRSQ9HAH7 460 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 TMEM51Q9NW97 253 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 DDIT4Q9NX09 232 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 TAB2Q9NYJ8 693 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 RRN3Q9NYV6 651 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 KIAA1522Q9P206 1035 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 USP36Q9P275 1121 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 XPO7Q9UIA9 1087 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 TDRD6O60522 2096 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 LAMA1P25391 3075 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 NYNRINQ9P2P1 1898 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 TRPM6Q9BX84 2022 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 SYNJ2BP-COX16A0A087WUM0 186 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 LNP1A1A4G5 178 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 LRRC10BA6NIK2 292 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 C4orf47A7E2U8 309 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 F5H5T6 163 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 F8VZ95 297 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 CDX4O14627 284 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 ATMINO43313 823 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 LUC7L3O95232 432 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 MOCS3O95396 460 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 LSM8O95777 96 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 F9P00740 461 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 IGLV3-19P01714 112 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 ASLP04424 464 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 CFIP05156 583 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 SRPRAP08240 638 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 SERPINF2P08697 491 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 HLA-EP13747 358 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 CDK11BP21127 795 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 CDH5P33151 784 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 CSKP41240 450 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 MATKP42679 507 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 TPMTP51580 245 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 COPB1P53618 953 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 COPAP53621 1224 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 POLR2FP61218 127 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 ST8SIA6P61647 398 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 GFPT1Q06210 699 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 LMAN2Q12907 356 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 NME3Q13232 169 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 SLC12A1Q13621 1099 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 CDH18Q13634 790 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 STX1AQ16623 288 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 PTPRNQ16849 979 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 PTPN20Q4JDL3 420 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 FSCBQ5H9T9 825 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 WDR45BQ5MNZ6 344 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 RABGAP1LQ5R372 815 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 CCDC183Q5T5S1 534 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 TAF3Q5VWG9 929 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 DAB2IPQ5VWQ8 1189 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 PEAR1Q5VY43 1037 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 RAP1GAP2Q684P5 730 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 SLC23A3Q6PIS1 610 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 OLFML1Q6UWY5 402 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 SND1Q7KZF4 910 aaKnown RBP eCLIP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 NOP9Q86U38 636 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 CHSY1Q86X52 802 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 SLC41A1Q8IVJ1 513 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 ZNF366Q8N895 744 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 KDM1BQ8NB78 822 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 CADM4Q8NFZ8 388 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 OR2T3Q8NH03 318 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 TOE1Q96GM8 510 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 HSPA12BQ96MM6 686 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 PRICKLE1Q96MT3 831 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 PPP1R9BQ96SB3 815 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 PRMT1Q99873 361 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 EDEM2Q9BV94 578 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 GANQ9H2C0 597 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 WDCPQ9H6R7 721 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 TMEM9BQ9NQ34 198 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 PRSS16Q9NQE7 514 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 WSB2Q9NYS7 404 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.15□□□□□ -1.265e-8■■■□□ 16.8
SF3B3-209ENST00000567635 COX16Q9P0S2 106 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 LIMA1Q9UHB6 759 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 INTS6Q9UL03 887 aaKnown RBP7.15□□□□□ -1.26
SF3B3-209ENST00000567635 SLC6A14Q9UN76 642 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 ERVW-1Q9UQF0 538 aa7.15□□□□□ -1.26
SF3B3-209ENST00000567635 MUC22E2RYF6 1773 aaPredicted RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms