RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 HOXD9P28356 352 aaPredicted RBP23.4■■□□□ 1.34
UBFD1-208ENST00000567264 EPHB2P29323 1055 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 SOX9P48436 509 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 PDK2Q15119 407 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 CHST9Q7L1S5 443 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 RALGPS2Q86X27 583 aaPredicted RBP23.4■■□□□ 1.34
UBFD1-208ENST00000567264 CIR1Q86X95 450 aaPredicted RBP23.4■■□□□ 1.34
UBFD1-208ENST00000567264 MAP7D3Q8IWC1 876 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 NAT16Q8N8M0 369 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 ZNF557Q8N988 423 aaPredicted RBP23.4■■□□□ 1.34
UBFD1-208ENST00000567264 UBE2Q2Q8WVN8 375 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 CD101Q93033 1021 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 EXOC4Q96A65 974 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 PCDH18Q9HCL0 1135 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 WNT16Q9UBV4 365 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 CA14Q9ULX7 337 aa23.4■■□□□ 1.34
UBFD1-208ENST00000567264 COL4A2P08572 1712 aa23.39■■□□□ 1.34
UBFD1-208ENST00000567264 CCDC66A2RUB6 948 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 SPECC1L-ADORA2AF8WAN1 911 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 DAPK3O43293 454 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 KIF5CO60282 957 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 CACNG3O60359 315 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 CLDN11O75508 207 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 LUC7L3O95232 432 aaKnown RBP23.39■■□□□ 1.33
UBFD1-208ENST00000567264 CTNNA2P26232 953 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 CTHP32929 405 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 CTNNA1P35221 906 aaKnown RBP23.39■■□□□ 1.33
UBFD1-208ENST00000567264 IRAK1P51617 712 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 CDH4P55283 916 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 CDH18Q13634 790 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 MLF2Q15773 248 aaPredicted RBP23.39■■□□□ 1.33
UBFD1-208ENST00000567264 GAB4Q2WGN9 574 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 C1orf228Q6PIY5 440 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 MFN1Q8IWA4 741 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 CARNMT1Q8N4J0 409 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 P2RY11Q96G91 374 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 SLC2A11Q9BYW1 496 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 CATSPERBQ9H7T0 1116 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 ARHGEF3Q9NR81 526 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 DNAJC17Q9NVM6 304 aaKnown RBP23.39■■□□□ 1.33
UBFD1-208ENST00000567264 MPP6Q9NZW5 540 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 MYOFQ9NZM1 2061 aa23.39■■□□□ 1.33
UBFD1-208ENST00000567264 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.38■■□□□ 1.33
UBFD1-208ENST00000567264 LRRD1A4D1F6 860 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 MIF4GDA9UHW6 222 aaKnown RBP23.38■■□□□ 1.33
UBFD1-208ENST00000567264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.38■■□□□ 1.33
UBFD1-208ENST00000567264 H0Y626 953 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 FGF10O15520 208 aaPredicted RBP23.38■■□□□ 1.33
UBFD1-208ENST00000567264 CNTN5O94779 1100 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 RHOQP17081 205 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 GOT1P17174 413 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 MSNP26038 577 aaKnown RBP23.38■■□□□ 1.33
UBFD1-208ENST00000567264 EIF2DP41214 584 aaKnown RBP23.38■■□□□ 1.33
UBFD1-208ENST00000567264 ZXDAP98168 799 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 ZNF177Q13360 481 aaPredicted RBP23.38■■□□□ 1.33
UBFD1-208ENST00000567264 ALFQ53S48 1182 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 TPRG1Q6ZUI0 275 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 UBL4BQ8N7F7 174 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 CALN1Q9BXU9 219 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 RETREG1Q9H6L5 497 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 RCOR3Q9P2K3 495 aaPredicted RBP23.38■■□□□ 1.33
UBFD1-208ENST00000567264 DEC1Q9P2X7 70 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 PCDHA3Q9Y5H8 950 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 COL4A3Q01955 1670 aa23.38■■□□□ 1.33
UBFD1-208ENST00000567264 DCXO43602 365 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 TULP3O75386 442 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 SLC34A2O95436 690 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 KDELR1P24390 212 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 HOXC13P31276 330 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 MARCKSL1P49006 195 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 HCAR3P49019 387 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 ARSEP51690 589 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 PRKCQQ04759 706 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 PREPLQ4J6C6 727 aaPredicted RBP23.37■■□□□ 1.33
UBFD1-208ENST00000567264 RNF43Q68DV7 783 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 GRAMD4Q6IC98 578 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 RFX8Q6ZV50 586 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 TFAP2DQ7Z6R9 452 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 C12orf40Q86WS4 652 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 ETFBKMTQ8IXQ9 262 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 KATNAL2Q8IYT4 538 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 FAM71BQ8TC56 605 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 KRT35Q92764 455 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 SHDQ96IW2 340 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 KCND1Q9NSA2 647 aa23.37■■□□□ 1.33
UBFD1-208ENST00000567264 CWC15Q9P013 229 aaKnown RBP23.37■■□□□ 1.33
UBFD1-208ENST00000567264 UNC80Q8N2C7 3258 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 PI4K2BG5E9Z4 385 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 MAN2B1O00754 1011 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 OPRD1P41143 372 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 SLC6A11P48066 632 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 DGKGP49619 791 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 DPYSL3Q14195 570 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 ZNF569Q5MCW4 686 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 ARTNQ5T4W7 220 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 IER5LQ5T953 404 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 RAPGEF5Q92565 580 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 CSPG4P5Q96PW8 444 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 PNKPQ96T60 521 aa23.36■■□□□ 1.33
UBFD1-208ENST00000567264 P2RY13Q9BPV8 354 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms