RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 MFSD14CQ5VZR4 134 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 USPL1Q5W0Q7 1092 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 SMIM5Q71RC9 77 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 B3GALNT2Q8NCR0 500 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ZNF75CPQ92670 426 aaPredicted RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 CCDC115Q96NT0 180 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 CCDC3Q9BQI4 270 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 LRRC4BQ9NT99 713 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 LIMD1Q9UGP4 676 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 PLK4O00444 970 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 IFRD1O00458 451 aaPredicted RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 CCNE2O96020 404 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ZNF806P0C7X5 589 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ZNF12P17014 697 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 NPR2P20594 1047 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ACTR3P61158 418 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 BIKQ13323 160 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 SLC25A41Q8N5S1 370 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 EMC1Q8N766 993 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 UCMAQ8WVF2 138 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 SERAC1Q96JX3 654 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 AIFM2Q9BRQ8 373 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 SPAG4Q9NPE6 437 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 CCDC177Q9NQR7 707 aaPredicted RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 NUP153P49790 1475 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 MYH13Q9UKX3 1938 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 A0A0G2JPF8 293 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 HNRNPCL3B7ZW38 293 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ZBTB22O15209 634 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 HNRNPCL4P0DMR1 293 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 PCNAP12004 261 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ALDH1A3P47895 512 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 RENBPP51606 427 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 NEK3P51956 506 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 RGS1Q08116 209 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 TRIM32Q13049 653 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 CCNG2Q16589 344 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 EIF2S3LQ2VIR3 472 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 STK40Q8N2I9 435 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ZNF655Q8N720 491 aaPredicted RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 MAGEC3Q8TD91 643 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 UBE2E3Q969T4 207 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 TPD52L3Q96J77 140 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 GNPTGQ9UJJ9 305 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 CLRN2A0PK11 232 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 ZNF276Q8N554 614 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 OR56A4Q8NGH8 313 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 HPDLQ96IR7 371 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 TDRD1Q9BXT4 1180 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 NUP50Q9UKX7 468 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 UBQLN1Q9UMX0 589 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 SLC12A4Q9UP95 1085 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 NEDD4P46934 1319 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 PCP4L1A6NKN8 68 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 AKAP8O43823 692 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 PTPN3P26045 913 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 DSG3P32926 999 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 TAF5Q15542 800 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 TCEA2Q15560 299 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 DDI2Q5TDH0 399 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ACAD10Q6JQN1 1059 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 SWSAP1Q6NVH7 229 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 APOBEC3FQ8IUX4 373 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 RPRD1AQ96P16 312 aaPredicted RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 KLF6Q99612 283 aaPredicted RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 SMAD5Q99717 465 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 TRIT1Q9H3H1 467 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 SRP68Q9UHB9 627 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 SNX8Q9Y5X2 465 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 G3V2T6 193 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 IFNA7P01567 189 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 MRPS22P82650 360 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 PDK3Q15120 406 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ZNF549Q6P9A3 640 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 QRFPRQ96P65 431 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 ZCWPW1Q9H0M4 648 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 AGPAT5Q9NUQ2 364 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 PRELID1Q9Y255 219 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 CRYL1Q9Y2S2 319 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 PXDNLA1KZ92 1463 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 LRIG2O94898 1065 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 KCNH1O95259 989 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 RPL22P35268 128 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 MCAMP43121 646 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 DDX39BQ13838 428 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 ACAP1Q15027 740 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 GLB1LQ6UWU2 654 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.19□□□□□ -1.583e-6■■■■■ 65
SMG1-211ENST00000565324 DCP1BQ8IZD4 617 aaKnown RBP5.19□□□□□ -1.58
SMG1-211ENST00000565324 FBXO39Q8N4B4 442 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 NEDD4LQ96PU5 975 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 PLEKHG4BQ96PX9 1271 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 TMEM47Q9BQJ4 181 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 CHST12Q9NRB3 414 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 VPS45Q9NRW7 570 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 FAM49BQ9NUQ9 324 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 IKZF3Q9UKT9 509 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 NAALADL1Q9UQQ1 740 aa5.19□□□□□ -1.58
SMG1-211ENST00000565324 MAP3K4Q9Y6R4 1608 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms