RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 LRIG2O94898 1065 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 LUC7L3O95232 432 aaKnown RBP19.4■□□□□ 0.7
RAB40C-207ENST00000563109 ARL4AP40617 200 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 CDH6P55285 790 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 DPYSL2Q16555 572 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 CA9Q16790 459 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 C5orf22Q49AR2 442 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 MANEALQ5VSG8 457 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 TXNRD3NBQ6F5E7 133 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 GRAMD4Q6IC98 578 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 CHST9Q7L1S5 443 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 PEX26Q7Z412 305 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 CIR1Q86X95 450 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-207ENST00000563109 MAP7D3Q8IWC1 876 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 ZNF683Q8IZ20 524 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 CARNMT1Q8N4J0 409 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 NAT16Q8N8M0 369 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 LRRC57Q8N9N7 239 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 CD101Q93033 1021 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 MYEOVQ96EZ4 313 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 KCTD15Q96SI1 283 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-207ENST00000563109 SLC2A11Q9BYW1 496 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 TRMT1Q9NXH9 659 aaKnown RBP19.4■□□□□ 0.7
RAB40C-207ENST00000563109 DDX56Q9NY93 547 aaKnown RBP19.4■□□□□ 0.7
RAB40C-207ENST00000563109 DEC1Q9P2X7 70 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 AMFRQ9UKV5 643 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 DOCK4Q8N1I0 1966 aa19.39■□□□□ 0.7
RAB40C-207ENST00000563109 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-207ENST00000563109 DRGXA6NNA5 263 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 FAM72CH0Y354 149 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 FGF10O15520 208 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-207ENST00000563109 DAPK3O43293 454 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 TULP3O75386 442 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 KRT1P04264 644 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 EPHB2P29323 1055 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 DGKGP49619 791 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 CDH4P55283 916 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 SIGLEC14Q08ET2 396 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 SEMA3BQ13214 749 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 ZNF177Q13360 481 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-207ENST00000563109 GAB4Q2WGN9 574 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 FAM72AQ5TYM5 149 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 FAM72DQ6L9T8 149 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 ZNF852Q6ZMS4 543 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 FAM72BQ86X60 149 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 SUGP1Q8IWZ8 645 aaKnown RBP19.39■□□□□ 0.69
RAB40C-207ENST00000563109 ETFBKMTQ8IXQ9 262 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 SIX5Q8N196 739 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 KCTD6Q8NC69 237 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 EDAQ92838 391 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 P2RY13Q9BPV8 354 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 RETREG1Q9H6L5 497 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 CATSPERBQ9H7T0 1116 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 KLHL11Q9NVR0 708 aa19.39■□□□□ 0.69
RAB40C-207ENST00000563109 MRPS17Q9Y2R5 130 aaKnown RBP19.39■□□□□ 0.69
RAB40C-207ENST00000563109 UNC80Q8N2C7 3258 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 RHOQP17081 205 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 OPRD1P41143 372 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 OXCT1P55809 520 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 KDSRQ06136 332 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 PDK2Q15119 407 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 NUDT18Q6ZVK8 323 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 C12orf40Q86WS4 652 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 REXO1L1PQ8IX06 675 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 CCAR2Q8N163 923 aaKnown RBP19.38■□□□□ 0.69
RAB40C-207ENST00000563109 TRIM58Q8NG06 486 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 FAM3CQ92520 227 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 PNKPQ96T60 521 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 MAGEB5Q9BZ81 275 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 PCDH18Q9HCL0 1135 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 DONSONQ9NYP3 566 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 MPP6Q9NZW5 540 aa19.38■□□□□ 0.69
RAB40C-207ENST00000563109 RCOR3Q9P2K3 495 aaPredicted RBP19.38■□□□□ 0.69
RAB40C-207ENST00000563109 CCDC66A2RUB6 948 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 LRRD1A4D1F6 860 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 MIF4GDA9UHW6 222 aaKnown RBP19.37■□□□□ 0.69
RAB40C-207ENST00000563109 CNTN5O94779 1100 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 FTCDO95954 541 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 APODP05090 189 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 MSNP26038 577 aaKnown RBP19.37■□□□□ 0.69
RAB40C-207ENST00000563109 HOXC13P31276 330 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 IRAK1P51617 712 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 GRSF1Q12849 480 aaKnown RBP eCLIP19.37■□□□□ 0.693e-7■■■■□ 19.7
RAB40C-207ENST00000563109 PON2Q15165 354 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 ALFQ53S48 1182 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 HS1BP3Q53T59 392 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 C6orf118Q5T5N4 469 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 IER5LQ5T953 404 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 RNF43Q68DV7 783 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 RFX8Q6ZV50 586 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 TFAP2DQ7Z6R9 452 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 NT5DC3Q86UY8 548 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 UBL4BQ8N7F7 174 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 FIBINQ8TAL6 211 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 UBE2Q2Q8WVN8 375 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 CHFRQ96EP1 664 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 P2RY11Q96G91 374 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 CALN1Q9BXU9 219 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 ARHGEF4Q9NR80 690 aa19.37■□□□□ 0.69
RAB40C-207ENST00000563109 KRBA1A5PL33 1030 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms