RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 DTNAQ9Y4J8 743 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 PCDHB2Q9Y5E7 798 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 PNMA6EA0A0J9YXQ4 647 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 TMEM272A0A1B0GTI8 110 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 C2CD4BA6NLJ0 364 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 J3KTA2 159 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 NTN3O00634 580 aaPredicted RBP3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 EPN2O95208 641 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 FGF2P09038 288 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 SETSIPP0DME0 302 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 HTR3AP46098 478 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 ALDH18A1P54886 795 aaKnown RBP3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 KPNB1Q14974 876 aaKnown RBP3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 TOGARAM2Q6ZUX3 1019 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 MORC1Q86VD1 984 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 GATAD2AQ86YP4 633 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 OR52L2PQ8NGH6 319 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 WFIKKN2Q8TEU8 576 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 TRMT61AQ96FX7 289 aaKnown RBP3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 PRR11Q96HE9 360 aaPredicted RBP3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 TTLL2Q9BWV7 592 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 NUAK2Q9H093 628 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 FZD3Q9NPG1 666 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 CHST12Q9NRB3 414 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 FBXO28Q9NVF7 368 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 VPS4AQ9UN37 437 aa3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 SIRT4Q9Y6E7 314 aaPredicted RBP3.57□□□□□ -1.84
HDGFL3-202ENST00000562702 NPC1O15118 1278 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 FFAR2O15552 330 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 TLX3O43711 291 aaPredicted RBP3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 ZNF432O94892 652 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 NTSR2O95665 410 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 PLAUP00749 431 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 CGAP01215 116 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 MBPP02686 304 aaPredicted RBP3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 NPPBP16860 134 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 ARRB2P32121 409 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 ACSM6Q6P461 480 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 PIK3AP1Q6ZUJ8 805 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 IPO4Q8TEX9 1081 aaKnown RBP3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 WDR60Q8WVS4 1066 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 GLMPQ8WWB7 406 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 AKAP1Q92667 903 aaKnown RBP eCLIP3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 C18orf8Q96DM3 657 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 FAR2Q96K12 515 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 SLITRK1Q96PX8 696 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 PRPF18Q99633 342 aaKnown RBP3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 PLSCR4Q9NRQ2 329 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 SLC52A1Q9NWF4 448 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 HIF1ANQ9NWT6 349 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 SEMA5BQ9P283 1151 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 CDC23Q9UJX2 597 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 NFU1Q9UMS0 254 aa3.56□□□□□ -1.84
HDGFL3-202ENST00000562702 GXYLT2A0PJZ3 443 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 GOLGA6L3A6NEY3 463 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 ZNF814B7Z6K7 855 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 PCDH17O14917 1159 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 PIP5K1BO14986 540 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 DHHO43323 396 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 LDB3O75112 727 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 PAPSS2O95340 614 aaPredicted RBP3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 ITGA5P08648 1049 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 ALADP13716 330 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 NDUFS1P28331 727 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 SLC8A1P32418 973 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 VPS41P49754 854 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 TNFAIP2Q03169 654 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 ELF2Q15723 593 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 GLE1Q53GS7 698 aaKnown RBP3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 MSANTD2Q6P1R3 559 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 PGBD2Q6P3X8 592 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 NRSN1Q8IZ57 195 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 SAMD3Q8N6K7 520 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 ZNF527Q8NB42 609 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 ELP5Q8TE02 316 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 SENP7Q9BQF6 1050 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 PAAF1Q9BRP4 392 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 CDCP1Q9H5V8 836 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 EPS8L2Q9H6S3 715 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 FSCN3Q9NQT6 498 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 PAPOLBQ9NRJ5 636 aaKnown RBP3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 ASNSD1Q9NWL6 643 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 PCDHA12Q9UN75 941 aa3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 HEMK1Q9Y5R4 338 aaPredicted RBP3.55□□□□□ -1.84
HDGFL3-202ENST00000562702 A0A087WV62 115 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 ABHD14A-ACY1A0A1B0GW23 586 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 PRPF4O43172 522 aaKnown RBP eCLIP3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 ASNA1O43681 348 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 SOCS5O75159 536 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 TAF5LO75529 589 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 SKAP2O75563 359 aaPredicted RBP3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 ANXA6P08133 673 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 HOXB2P14652 356 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 SERPINB3P29508 390 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 HOXD12P35452 270 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 SPARCL1Q14515 664 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 KIF26BQ2KJY2 2108 aa3.54□□□□□ -1.84
HDGFL3-202ENST00000562702 WASHC2DQ5SRD0 308 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms