RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 SUMF1Q8NBK3 374 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 PCDH19Q8TAB3 1148 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 SLC35B2Q8TB61 432 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 ADAM32Q8TC27 787 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 ACTL9Q8TC94 416 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.78□□□□□ -1.16
TPM1-231ENST00000561395 DQX1Q8TE96 717 aaKnown RBP7.78□□□□□ -1.16
TPM1-231ENST00000561395 TMEM169Q96HH4 297 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 CEP295NLQ96MC4 621 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 CSPG4P5Q96PW8 444 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 MAK16Q9BXY0 300 aaKnown RBP7.78□□□□□ -1.16
TPM1-231ENST00000561395 FAM129AQ9BZQ8 928 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 NEUROG2Q9H2A3 272 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 CRISPLD1Q9H336 500 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 FBXO44Q9H4M3 255 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 ABCC13Q9NSE7 274 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 ZDHHC18Q9NUE0 388 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 SPG21Q9NZD8 308 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 COX16Q9P0S2 106 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 WHRNQ9P202 907 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 NCDNQ9UBB6 729 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 STK39Q9UEW8 545 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 ASIC3Q9UHC3 531 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 FAM153AQ9UHL3 310 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 DRG1Q9Y295 367 aaKnown RBP7.78□□□□□ -1.16
TPM1-231ENST00000561395 SNX24Q9Y343 169 aa7.78□□□□□ -1.16
TPM1-231ENST00000561395 COL4A3Q01955 1670 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 ZFYVE26Q68DK2 2539 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 A0A1W2PQH9 124 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 DCDC2BA2VCK2 349 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 KRBA1A5PL33 1030 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 H3BRJ5 948 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 MCF2LO15068 1137 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 IRAK2O43187 625 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 NARSO43776 548 aaKnown RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 SOAT2O75908 522 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 ATF2P15336 505 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 ZFXP17010 805 aaPredicted RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 GOT1P17174 413 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 RPL17P18621 184 aaKnown RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 IVDP26440 423 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 KLRC2P26717 231 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 OR1D2P34982 312 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 ADRA1BP35368 520 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 ARL4AP40617 200 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 GLUD2P49448 558 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 CXCR3P49682 368 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 PGFP49763 221 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 EIF3EP60228 445 aaKnown RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 USP46P62068 366 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 RPL10AP62906 217 aaKnown RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 DUSP4Q13115 394 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 SEMA3BQ13214 749 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 EIF4EBP2Q13542 120 aaPredicted RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 NOMO1Q15155 1222 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 MGAT5BQ3V5L5 792 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 PPP6R3Q5H9R7 873 aaPredicted RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 BTBD8Q5XKL5 378 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 MSANTD2Q6P1R3 559 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 NPNTQ6UXI9 565 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 TMC7Q7Z402 723 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 DDX53Q86TM3 631 aaKnown RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 MON1AQ86VX9 555 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 PYROXD2Q8N2H3 581 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 ARHGAP18Q8N392 663 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 MREGQ8N565 214 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 C12orf76Q8N812 135 aaPredicted RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 CCDC89Q8N998 374 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 STKLD1Q8NE28 680 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 CCHCR1Q8TD31 782 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 RNF139Q8WU17 664 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 PTCD2Q8WV60 388 aaKnown RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 SNF8Q96H20 258 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 GDAP1L1Q96MZ0 367 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 FMO2Q99518 471 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 SEPT5Q99719 369 aaPredicted RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 CLSTN3Q9BQT9 956 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 RTKNQ9BST9 563 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 TTLL2Q9BWV7 592 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 MAGEB5Q9BZ81 275 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 VIPAS39Q9H9C1 493 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 PRDM16Q9HAZ2 1276 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 NMUR1Q9HB89 426 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 PCDH9Q9HC56 1237 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 TMPRSS4Q9NRS4 437 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 COMMD8Q9NX08 183 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 FAM53CQ9NYF3 392 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 CWC15Q9P013 229 aaKnown RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 GMIPQ9P107 970 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 SAE1Q9UBE0 346 aaPredicted RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 AFF4Q9UHB7 1163 aaKnown RBP7.77□□□□□ -1.17
TPM1-231ENST00000561395 DPP7Q9UHL4 492 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 FBXW11Q9UKB1 542 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 ZNF148Q9UQR1 794 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 SLC27A5Q9Y2P5 690 aa7.77□□□□□ -1.17
TPM1-231ENST00000561395 PRR5-ARHGAP8B1AHC4 643 aa7.76□□□□□ -1.17
TPM1-231ENST00000561395 I6L893 689 aaPredicted RBP7.76□□□□□ -1.17
TPM1-231ENST00000561395 C2CD2LO14523 706 aa7.76□□□□□ -1.17
TPM1-231ENST00000561395 TP73O15350 636 aa7.76□□□□□ -1.17
TPM1-231ENST00000561395 CLASP2O75122 1294 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms