RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CAPN12Q6ZSI9 719 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 PLEKHH3Q7Z736 793 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 TTC39CQ8N584 583 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 UBA3Q8TBC4 463 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 MRRFQ96E11 262 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 HSPBAP1Q96EW2 488 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 HNRNPABQ99729 332 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 ABHD16BQ9H3Z7 469 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 PFDN4Q9NQP4 134 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 SETD4Q9NVD3 440 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 ZNF711Q9Y462 761 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 CEPT1Q9Y6K0 416 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 SQORQ9Y6N5 450 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 MAGEB3O15480 346 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 ADCY6O43306 1168 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 DNAJA2O60884 412 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 FAM58BPP0C7Q3 252 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 SERPINB6P35237 376 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 HOXD12P35452 270 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 ALDH1A3P47895 512 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 ACAP1Q15027 740 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 KIZQ2M2Z5 673 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 KCNT1Q5JUK3 1230 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 RARS2Q5T160 578 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 LCLAT1Q6UWP7 414 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 BBS12Q6ZW61 710 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 CRLF3Q8IUI8 442 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 TTC13Q8NBP0 860 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 NPLOC4Q8TAT6 608 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 FRMD8P1Q9BZ68 369 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 MKS1Q9NXB0 559 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 PSMD13Q9UNM6 376 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 INPP5FQ9Y2H2 1132 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 SCN1AP35498 2009 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 RRN3P2A6NIE6 340 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 PRR5-ARHGAP8B1AHC4 643 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 SERPINB7O75635 380 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 ALOX15P16050 662 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 PCSK6P29122 969 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 MIPP30301 263 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 HOXA11P31270 313 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 COPAP53621 1224 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 HDAC4P56524 1084 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 ARHGAP8P85298 464 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 EFTUD2Q15029 972 aaKnown RBP eCLIP14.33□□□□□ -0.125e-7■■■■□ 25.4
RABGGTA-220ENST00000560998 CNGA3Q16281 694 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 SH2D5Q6ZV89 423 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 DPH6Q7L8W6 267 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 CMASQ8NFW8 434 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 AGAP3Q96P47 875 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 GCNAQ96QF7 691 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 PARK7Q99497 189 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 TMEM121Q9BTD3 319 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 NT5C1AQ9BXI3 368 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 CXCL16Q9H2A7 254 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 FAM96AQ9H5X1 160 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 DERAQ9Y315 318 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 FADS3Q9Y5Q0 445 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 IKBKGQ9Y6K9 419 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 HTR3EA5X5Y0 456 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 E5RJQ4 531 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 BOLA2-SMG1P6H3BVE0 249 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 GOLGA8RI6L899 631 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 SGK1O00141 431 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 CST8O60676 142 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 TRUB2O95900 331 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 PFKMP08237 780 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 SRGAP2BP0DMP2 458 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 ZNF143P52747 638 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 DYNLT1P63172 113 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 PDAP1Q13442 181 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 FAM110CQ1W6H9 321 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 HSF5Q4G112 596 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 FAM102AQ5T9C2 384 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 KBTBD6Q86V97 674 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 ARID3BQ8IVW6 561 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 PPIL6Q8IXY8 311 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 PQLC1Q8N2U9 271 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 ACTL9Q8TC94 416 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 E2F7Q96AV8 911 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 FAM49AQ9H0Q0 323 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 ASNSD1Q9NWL6 643 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 UBAP1Q9NZ09 502 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 SIRPGQ9P1W8 387 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 PCSK1NQ9UHG2 260 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 CDH22Q9UJ99 828 aa14.33□□□□□ -0.12
RABGGTA-220ENST00000560998 ZNF236Q9UL36 1845 aa14.32□□□□□ -0.12
RABGGTA-220ENST00000560998 SDR42E2A6NKP2 422 aa14.32□□□□□ -0.12
RABGGTA-220ENST00000560998 GPR32O75388 356 aa14.32□□□□□ -0.12
RABGGTA-220ENST00000560998 SPAG6O75602 509 aa14.32□□□□□ -0.12
RABGGTA-220ENST00000560998 AQP5P55064 265 aa14.32□□□□□ -0.12
RABGGTA-220ENST00000560998 FKBP1BP68106 108 aa14.32□□□□□ -0.12
RABGGTA-220ENST00000560998 MYBPC1Q00872 1141 aa14.32□□□□□ -0.12
RABGGTA-220ENST00000560998 PTK7Q13308 1070 aa14.32□□□□□ -0.12
RABGGTA-220ENST00000560998 TEX44Q53QW1 395 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms