RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 EMC1Q8N766 993 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 C12orf76Q8N812 135 aaPredicted RBP5.69□□□□□ -1.5
ZEB1-220ENST00000560909 SMRP1Q8NCR6 262 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 STKLD1Q8NE28 680 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 ADAMTS19Q8TE59 1207 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 TEKT4Q8WW24 435 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 NTAN1Q96AB6 310 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 FCRL2Q96LA5 508 aaPredicted RBP5.69□□□□□ -1.5
ZEB1-220ENST00000560909 TBCBQ99426 244 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 CDX2Q99626 313 aaPredicted RBP5.69□□□□□ -1.5
ZEB1-220ENST00000560909 TLR10Q9BXR5 811 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 SLC46A2Q9BY10 475 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 RNF38Q9H0F5 515 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 ALG2Q9H553 416 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 TASP1Q9H6P5 420 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 LZTFL1Q9NQ48 299 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 ASAH2Q9NR71 780 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 OLA1Q9NTK5 396 aaKnown RBP5.69□□□□□ -1.5
ZEB1-220ENST00000560909 TRMT1Q9NXH9 659 aaKnown RBP5.69□□□□□ -1.5
ZEB1-220ENST00000560909 ARHGEF38Q9NXL2 777 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 STOML1Q9UBI4 398 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 ANAPC7Q9UJX3 599 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 STAP1Q9ULZ2 295 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 GUCA1BQ9UMX6 200 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 ARHGAP26Q9UNA1 814 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 HBS1LQ9Y450 684 aaKnown RBP5.69□□□□□ -1.5
ZEB1-220ENST00000560909 PCDHA3Q9Y5H8 950 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 GREB1Q4ZG55 1949 aa5.69□□□□□ -1.5
ZEB1-220ENST00000560909 MTCL1Q9Y4B5 1905 aaKnown RBP5.69□□□□□ -1.5
ZEB1-220ENST00000560909 PLXNA3P51805 1871 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 ATG2AQ2TAZ0 1938 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 XIRP2A4UGR9 3374 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 MACROD2A1Z1Q3 448 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 C2orf78A6NCI8 922 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 MIF4GDA9UHW6 222 aaKnown RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 KIF2AO00139 706 aaPredicted RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 CES2O00748 559 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 MDM4O15151 490 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 DDX3YO15523 660 aaKnown RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 COCHO43405 550 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 PSTPIP1O43586 416 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 BUB1O43683 1085 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 KIF5CO60282 957 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 PALMO75781 387 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 GRAP2O75791 330 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 LATS1O95835 1130 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 TBX18O95935 607 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 SLC2A3P11169 496 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 NCAM1P13591 858 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 COMTP21964 271 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 PSMA2P25787 234 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 IL1R2P27930 398 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 GABRR2P28476 465 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 MIPP30301 263 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 CTNNA1P35221 906 aaKnown RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 PTPN7P35236 360 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 RDXP35241 583 aaKnown RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 ADRA1BP35368 520 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 ATP5C1P36542 298 aaKnown RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 NOP2P46087 812 aaKnown RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 ZNF135P52742 658 aaPredicted RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 ZXDBP98169 803 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 SEMA3BQ13214 749 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 C15orf59Q2T9L4 293 aaPredicted RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 C5orf22Q49AR2 442 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 RAB6CQ53S08 254 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 BRMS1LQ5PSV4 323 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 SH3PXD2AQ5TCZ1 1133 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 RNF43Q68DV7 783 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 CC2D1AQ6P1N0 951 aaPredicted RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 IGF2-ASQ6U949 168 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 TMC5Q6UXY8 1006 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 GRASPQ7Z6J2 395 aaPredicted RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 CPNE8Q86YQ8 564 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 FAM217AQ8IXS0 508 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 KATNAL2Q8IYT4 538 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 ZNF683Q8IZ20 524 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 FAM172AQ8WUF8 416 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 SMG7Q92540 1137 aaKnown RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 EDEM1Q92611 657 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 MRPS31Q92665 395 aaKnown RBP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 GOLGA1Q92805 767 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 FAM149B1Q96BN6 582 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 TCEAL4Q96EI5 215 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 C1orf74Q96LT6 269 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 CFAP57Q96MR6 1250 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 NECTIN4Q96NY8 510 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 SERPINB11Q96P15 392 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 WDR24Q96S15 920 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 SLC22A12Q96S37 553 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 HAPLN3Q96S86 360 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 CORO1BQ9BR76 489 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 RAB6CQ9H0N0 254 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 OSBPL2Q9H1P3 480 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 CCSER2Q9H7U1 834 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 ANLNQ9NQW6 1124 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 PIGVQ9NUD9 493 aa5.68□□□□□ -1.5
ZEB1-220ENST00000560909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.68□□□□□ -1.5
ZEB1-220ENST00000560909 HCFC1R1Q9NWW0 138 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms