RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 STAP1Q9ULZ2 295 aa14.58□□□□□ -0.08
TPM1-223ENST00000560445 A0A1B0GVM2 712 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 TARSL2A2RTX5 802 aaKnown RBP14.57□□□□□ -0.08
TPM1-223ENST00000560445 TCAF2A6NFQ2 919 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 METTL12A8MUP2 240 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 KCNU1A8MYU2 1149 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 GABBR2O75899 941 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 TRIM16O95361 564 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 LSM8O95777 96 aaKnown RBP14.57□□□□□ -0.08
TPM1-223ENST00000560445 IGLV3-25P01717 112 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 FYNP06241 537 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 SLC6A4P31645 630 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 SCNN1AP37088 669 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 COPAP53621 1224 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 TMEM215Q68D42 235 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 USP30Q70CQ3 517 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 SLC26A9Q7LBE3 791 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 DSG4Q86SJ6 1040 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 LGI2Q8N0V4 545 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 MINDY1Q8N5J2 469 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 DEFB119Q8N690 84 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 ADAM32Q8TC27 787 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 CYB5D2Q8WUJ1 264 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 SKA1Q96BD8 255 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 SLC2A13Q96QE2 648 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 SLC6A17Q9H1V8 727 aa14.57□□□□□ -0.08
TPM1-223ENST00000560445 DNAAF2Q9NVR5 837 aaKnown RBP14.57□□□□□ -0.08
TPM1-223ENST00000560445 EDDM13A0A1B0GTR0 161 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 BECN2A8MW95 431 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 KCNJ18B7U540 433 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 BCAT2O15382 392 aaPredicted RBP14.56□□□□□ -0.08
TPM1-223ENST00000560445 DAB1O75553 588 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 F9P00740 461 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 TACR2P21452 398 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 CD70P32970 193 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 NOS2P35228 1153 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 CSKP41240 450 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 AFF3P51826 1226 aaKnown RBP14.56□□□□□ -0.08
TPM1-223ENST00000560445 RPS24P62847 133 aaKnown RBP14.56□□□□□ -0.08
TPM1-223ENST00000560445 ECT2LQ008S8 904 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 SEMA3BQ13214 749 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 RAPGEF1Q13905 1077 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 KCNJ12Q14500 433 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 HNRNPA1L2Q32P51 320 aaKnown RBP14.56□□□□□ -0.08
TPM1-223ENST00000560445 DPCR1Q3MIW9 517 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 ZC3H12AQ5D1E8 599 aaKnown RBP14.56□□□□□ -0.08
TPM1-223ENST00000560445 PITRM1Q5JRX3 1037 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 FKBP15Q5T1M5 1219 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 SYPL2Q5VXT5 272 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 NADSYN1Q6IA69 706 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 OR6B2Q6IFH4 312 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 GJB7Q6PEY0 223 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 CLEC17AQ6ZS10 378 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 IRF2BP1Q8IU81 584 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 FAM71AQ8IYT1 594 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 GANCQ8TET4 914 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 ERLEC1Q96DZ1 483 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 P2RY11Q96G91 374 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 PRICKLE1Q96MT3 831 aaPredicted RBP14.56□□□□□ -0.08
TPM1-223ENST00000560445 CPXM1Q96SM3 734 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 NUCKS1Q9H1E3 243 aaKnown RBP14.56□□□□□ -0.08
TPM1-223ENST00000560445 MIR1-1HGQ9H1L0 117 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 OSGEPQ9NPF4 335 aa14.56□□□□□ -0.08
TPM1-223ENST00000560445 MUC22E2RYF6 1773 aaPredicted RBP14.55□□□□□ -0.08
TPM1-223ENST00000560445 EPG5Q9HCE0 2579 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 GOLGA6L7A0A1B0GV03 622 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 SEMA4FO95754 770 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 HLA-EP13747 358 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 SLC6A3Q01959 620 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 PTPRNQ16849 979 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 DCAF12L1Q5VU92 463 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 RAP1GAP2Q684P5 730 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 PASD1Q8IV76 773 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 DEFB106AQ8N104 65 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 ZNF397Q8NF99 534 aaPredicted RBP14.55□□□□□ -0.08
TPM1-223ENST00000560445 CNTNAP3BQ96NU0 1288 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 CNTNAP3Q9BZ76 1288 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 RSPH9Q9H1X1 276 aaPredicted RBP14.55□□□□□ -0.08
TPM1-223ENST00000560445 PRSS16Q9NQE7 514 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 SLC25A13Q9UJS0 675 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 FZD4Q9ULV1 537 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 PCDHB9Q9Y5E1 797 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 ASCC3Q8N3C0 2202 aaKnown RBP14.55□□□□□ -0.08
TPM1-223ENST00000560445 LAMA1P25391 3075 aa14.55□□□□□ -0.08
TPM1-223ENST00000560445 LRRC72A6NJI9 287 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 FOXN3O00409 490 aaPredicted RBP14.54□□□□□ -0.08
TPM1-223ENST00000560445 CLDN11O75508 207 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 ADH1BP00325 375 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 CALCAP01258 141 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 ZNF883P0CG24 379 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 MATKP42679 507 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 SGSHP51688 502 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 RPS14P62263 151 aaKnown RBP14.54□□□□□ -0.08
TPM1-223ENST00000560445 ELAVL3Q14576 367 aaKnown RBP14.54□□□□□ -0.08
TPM1-223ENST00000560445 SUZ12Q15022 739 aaKnown RBP14.54□□□□□ -0.08
TPM1-223ENST00000560445 ZNF423Q2M1K9 1284 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 INAVAQ3KP66 663 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 TCP11X2Q5H9J9 407 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 BRMS1LQ5PSV4 323 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 OLFML1Q6UWY5 402 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms