RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 SCML1Q9UN30 329 aa18.05■□□□□ 0.48
CRTC3-208ENST00000560098 LHX6Q9UPM6 363 aa18.05■□□□□ 0.48
CRTC3-208ENST00000560098 NAALADL1Q9UQQ1 740 aa18.05■□□□□ 0.48
CRTC3-208ENST00000560098 NCKAP1Q9Y2A7 1128 aa18.05■□□□□ 0.48
CRTC3-208ENST00000560098 ZFYVE26Q68DK2 2539 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 SART1O43290 800 aaKnown RBP18.04■□□□□ 0.48
CRTC3-208ENST00000560098 GPD2P43304 727 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 RPL34P49207 117 aaKnown RBP18.04■□□□□ 0.48
CRTC3-208ENST00000560098 CDH18Q13634 790 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 HNRNPA1L2Q32P51 320 aaKnown RBP18.04■□□□□ 0.48
CRTC3-208ENST00000560098 MS4A13Q5J8X5 152 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 LRSAM1Q6UWE0 723 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 LAYNQ6UX15 382 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 USP30Q70CQ3 517 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 CCDC117Q8IWD4 279 aaPredicted RBP18.04■□□□□ 0.48
CRTC3-208ENST00000560098 ELOA2Q8IYF1 753 aaPredicted RBP18.04■□□□□ 0.48
CRTC3-208ENST00000560098 KDM1BQ8NB78 822 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 EHBP1Q8NDI1 1231 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 IGSF8Q969P0 613 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 FAM149B1Q96BN6 582 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 SLC39A13Q96H72 371 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 MRGPRX3Q96LB0 322 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 ORAI3Q9BRQ5 295 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 NUCKS1Q9H1E3 243 aaKnown RBP18.04■□□□□ 0.48
CRTC3-208ENST00000560098 PABPC3Q9H361 631 aaKnown RBP18.04■□□□□ 0.48
CRTC3-208ENST00000560098 ST7Q9NRC1 585 aa18.04■□□□□ 0.48
CRTC3-208ENST00000560098 RNASEH1O60930 286 aaKnown RBP18.03■□□□□ 0.48
CRTC3-208ENST00000560098 SIN3BO75182 1162 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 ATXN1LP0C7T5 689 aaKnown RBP18.03■□□□□ 0.48
CRTC3-208ENST00000560098 ARID5BQ14865 1188 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 DCAF6Q58WW2 860 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 FSCBQ5H9T9 825 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 KIAA0895LQ68EN5 471 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 FOXR2Q6PJQ5 311 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 DHX40Q8IX18 779 aaKnown RBP18.03■□□□□ 0.48
CRTC3-208ENST00000560098 CFAP52Q8N1V2 620 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 ADAM32Q8TC27 787 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 GANCQ8TET4 914 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 NELFBQ8WX92 580 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 KREMEN1Q96MU8 473 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 CCDC86Q9H6F5 360 aaKnown RBP18.03■□□□□ 0.48
CRTC3-208ENST00000560098 FBXL12Q9NXK8 326 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 BTBD3Q9Y2F9 522 aa18.03■□□□□ 0.48
CRTC3-208ENST00000560098 NUMA1Q14980 2115 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 BICDL2A1A5D9 508 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 FAM47DPA6NHR8 397 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 PPP1R3GB7ZBB8 358 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 KCNK3O14649 394 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 DKK1O94907 266 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 MOCS2O96007 188 aaPredicted RBP18.02■□□□□ 0.48
CRTC3-208ENST00000560098 IGHV4-34P06331 123 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 ACADSBP45954 432 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 KCNH2Q12809 1159 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 SFSWAPQ12872 951 aaKnown RBP18.02■□□□□ 0.48
CRTC3-208ENST00000560098 PITRM1Q5JRX3 1037 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 MMS22LQ6ZRQ5 1243 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 BEND5Q7L4P6 421 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 TMPRSS7Q7RTY8 843 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 ADAT2Q7Z6V5 191 aaKnown RBP18.02■□□□□ 0.48
CRTC3-208ENST00000560098 TAC4Q86UU9 113 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 TRIM59Q8IWR1 403 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 TRIM62Q9BVG3 475 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 CNTN6Q9UQ52 1028 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 ERVW-1Q9UQF0 538 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 NBEAQ8NFP9 2946 aa18.02■□□□□ 0.48
CRTC3-208ENST00000560098 TARSL2A2RTX5 802 aaKnown RBP18.01■□□□□ 0.47
CRTC3-208ENST00000560098 H0Y8X5 98 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 CAPN9O14815 690 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 MID1O15344 667 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 PCDHGA12O60330 932 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 LUC7L3O95232 432 aaKnown RBP18.01■□□□□ 0.47
CRTC3-208ENST00000560098 MOCS3O95396 460 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 SRPRAP08240 638 aaKnown RBP18.01■□□□□ 0.47
CRTC3-208ENST00000560098 KRT5P13647 590 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 BMP6P22004 513 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 CTSOP43234 321 aaPredicted RBP18.01■□□□□ 0.47
CRTC3-208ENST00000560098 CTSKP43235 329 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 GRK6P43250 576 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 CCT8P50990 548 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 GALCP54803 685 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 RACK1P63244 317 aaKnown RBP18.01■□□□□ 0.47
CRTC3-208ENST00000560098 NUCB2P80303 420 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 CST6Q15828 149 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 KCNT1Q5JUK3 1230 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 C9orf64Q5T6V5 341 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 SYPL2Q5VXT5 272 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 DENND1BQ6P3S1 775 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 STK32AQ8WU08 396 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 SERGEFQ9UGK8 458 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 XPO7Q9UIA9 1087 aaKnown RBP18.01■□□□□ 0.47
CRTC3-208ENST00000560098 CTNND2Q9UQB3 1225 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 ITPR1Q14643 2758 aa18.01■□□□□ 0.47
CRTC3-208ENST00000560098 ANKRD11Q6UB99 2663 aaPredicted RBP18.01■□□□□ 0.47
CRTC3-208ENST00000560098 A0A1W2PPC4 97 aa18■□□□□ 0.47
CRTC3-208ENST00000560098 GOLGA8CPA6NN73 597 aa18■□□□□ 0.47
CRTC3-208ENST00000560098 TTC34A8MYJ7 566 aa18■□□□□ 0.47
CRTC3-208ENST00000560098 TNFSF14O43557 240 aa18■□□□□ 0.47
CRTC3-208ENST00000560098 GNA14O95837 355 aa18■□□□□ 0.47
CRTC3-208ENST00000560098 APOEP02649 317 aa18■□□□□ 0.47
CRTC3-208ENST00000560098 AFPP02771 609 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms