RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 NIF3L1Q9GZT8 377 aa16.24■□□□□ 0.19
AC243562.3-201ENST00000559866 CLCA2Q9UQC9 943 aa16.24■□□□□ 0.19
AC243562.3-201ENST00000559866 ERVH48-1M5A8F1 160 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 CTSOP43234 321 aaPredicted RBP16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 GCLMP48507 274 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 VAMP7P51809 220 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 TKTL1P51854 596 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 METAP1P53582 386 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 CST6Q15828 149 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 PROX2Q3B8N5 592 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 KDM7AQ6ZMT4 941 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 INTS8Q75QN2 995 aaKnown RBP16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 MMAAQ8IVH4 418 aaKnown RBP16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 HSCBQ8IWL3 235 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 SLC4A11Q8NBS3 891 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 TMA16Q96EY4 203 aaKnown RBP16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 PAGE5Q96GU1 130 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 PRICKLE1Q96MT3 831 aaPredicted RBP16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 GDF3Q9NR23 364 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 USP25Q9UHP3 1055 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 NCKAP1Q9Y2A7 1128 aa16.23■□□□□ 0.19
AC243562.3-201ENST00000559866 MAPK13O15264 365 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 ACTN4O43707 911 aaKnown RBP16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 TBL1XO60907 577 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 SDC3O75056 442 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 RNASEH2AO75792 299 aaKnown RBP16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 CDK4P11802 303 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 ACTN2P35609 894 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 FAM133BQ5BKY9 247 aaKnown RBP16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 ADGRF1Q5T601 910 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 C9orf64Q5T6V5 341 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 ARHGAP40Q5TG30 622 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 PM20D1Q6GTS8 502 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 MMS22LQ6ZRQ5 1243 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 ARHGAP18Q8N392 663 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 FAM181AQ8N9Y4 354 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 OR2T34Q8NGX1 318 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 GOLGA1Q92805 767 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 TATDN2Q93075 761 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 LGMNQ99538 433 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 MMRN2Q9H8L6 949 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 ADAMTS1Q9UHI8 967 aa16.22■□□□□ 0.19
AC243562.3-201ENST00000559866 YJEFN3A6XGL0 299 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 TTC34A8MYJ7 566 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 E7ENQ6 273 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 TRIM38O00635 465 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 ZBED1O96006 694 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 CKMT2P17540 419 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 POLR2EP19388 210 aaKnown RBP16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 NR2F2P24468 414 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 ACP1P24666 158 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 CSKP41240 450 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 HARS2P49590 506 aaKnown RBP16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 NUMBP49757 651 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 RAD23BP54727 409 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 ADPRHP54922 357 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 SLC8A3P57103 927 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 HNRNPA1L2Q32P51 320 aaKnown RBP16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 TAF1BQ53T94 588 aaPredicted RBP16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 PIK3R6Q5UE93 754 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 NADSYN1Q6IA69 706 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 TTC39CQ8N584 583 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 SEMA4DQ92854 862 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 TTC17Q96AE7 1141 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 HIC2Q96JB3 615 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 SERAC1Q96JX3 654 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 HEXIM2Q96MH2 286 aaKnown RBP16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 FAM129BQ96TA1 746 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 SUN2Q9UH99 717 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 TRAF3IP3Q9Y228 551 aa16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 HBS1LQ9Y450 684 aaKnown RBP16.21■□□□□ 0.19
AC243562.3-201ENST00000559866 TLR4O00206 839 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 GABBR2O75899 941 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 MPOP05164 745 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 ATP5BP06576 529 aaKnown RBP16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 RPL13P26373 211 aaKnown RBP16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 SLC8A1P32418 973 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 RXRGP48443 463 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 PSMD8P48556 350 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 ARRB1P49407 418 aaPredicted RBP16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 CCR5P51681 352 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 ENPEPQ07075 957 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 ADIGQ0VDE8 80 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 ILKQ13418 452 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 FSCBQ5H9T9 825 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 FAM186BQ8IYM0 893 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 TTC9Q92623 222 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 SNX21Q969T3 373 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 UBXN6Q9BZV1 441 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 STIM2Q9P246 746 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 FZD4Q9ULV1 537 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 CA5BQ9Y2D0 317 aa16.2■□□□□ 0.18
AC243562.3-201ENST00000559866 HECTD1Q9ULT8 2610 aa16.19■□□□□ 0.18
AC243562.3-201ENST00000559866 LRRC72A6NJI9 287 aa16.19■□□□□ 0.18
AC243562.3-201ENST00000559866 YKT6O15498 198 aa16.19■□□□□ 0.18
AC243562.3-201ENST00000559866 SIGLEC6O43699 453 aa16.19■□□□□ 0.18
AC243562.3-201ENST00000559866 MT-CO3P00414 261 aa16.19■□□□□ 0.18
AC243562.3-201ENST00000559866 IGLV3-27P01718 113 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms