RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 LGI2Q8N0V4 545 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 PGBD3Q8N328 593 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 KDM1BQ8NB78 822 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 C3orf20Q8ND61 904 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 ZC3H10Q96K80 434 aaKnown RBP8.77□□□□□ -1.01
TPM1-213ENST00000558400 HHIPQ96QV1 700 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 HAPLN3Q96S86 360 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 PCDHB18PQ96TA0 734 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 GABRG3Q99928 467 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 HINFPQ9BQA5 517 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 SELENOOQ9BVL4 669 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 CIPCQ9C0C6 399 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 RETREG1Q9H6L5 497 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 ABCB8Q9NUT2 735 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 ARHGEF38Q9NXL2 777 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 COX16Q9P0S2 106 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 STIM2Q9P246 746 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 SUN2Q9UH99 717 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 GGA2Q9UJY4 613 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 GMEB2Q9UKD1 530 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 CAPN11Q9UMQ6 739 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 COL4A3Q01955 1670 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 MYO16Q9Y6X6 1858 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 A0A1B0GVM2 712 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 TCAF2A6NFQ2 919 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 LRP3O75074 770 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 PAGE1O75459 146 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 CLDN11O75508 207 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 LUC7L3O95232 432 aaKnown RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 RETP07949 1114 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 DLDP09622 509 aaKnown RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 SDC4P31431 198 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 RDXP35241 583 aaKnown RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 FLT3P36888 993 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 NNMTP40261 264 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 PBX1P40424 430 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 PTPN9P43378 593 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 PXNP49023 591 aaPredicted RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 ST8SIA6P61647 398 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 RPS24P62847 133 aaKnown RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 PITX1P78337 314 aaPredicted RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 DMWDQ09019 674 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 PTP4A2Q12974 167 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 ZNF177Q13360 481 aaPredicted RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 ENPP2Q13822 863 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 AUHQ13825 339 aaKnown RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 ACAP1Q15027 740 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 ELF2Q15723 593 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 RSPO4Q2I0M5 234 aaPredicted RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 TSR1Q2NL82 804 aaKnown RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 C5orf22Q49AR2 442 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 SPDYCQ5MJ68 293 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 EGFLAMQ63HQ2 1017 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 RAP1GAP2Q684P5 730 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 MBLAC2Q68D91 279 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 ANO7Q6IWH7 933 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 FBXL22Q6P050 247 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 PRR23BQ6ZRT6 265 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 STRADAQ7RTN6 431 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 METTL3Q86U44 580 aaKnown RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 ADIPOR2Q86V24 386 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 SFTPA1Q8IWL2 248 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 DRC7Q8IY82 874 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 MCOLN2Q8IZK6 566 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 CARNMT1Q8N4J0 409 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 RXFP2Q8WXD0 754 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 COL26A1Q96A83 441 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 TTC17Q96AE7 1141 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 SPACA7Q96KW9 195 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 RPRD1AQ96P16 312 aaPredicted RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 TBCBQ99426 244 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 PRMT1Q99873 361 aaKnown RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 NCAPGQ9BPX3 1015 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 C11orf70Q9BRQ4 267 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 TTYH3Q9C0H2 523 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 TKTL2Q9H0I9 626 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 SIK2Q9H0K1 926 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 HAUS4Q9H6D7 363 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 FBRSQ9HAH7 460 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 PARVAQ9NVD7 372 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 IFNKQ9P0W0 207 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 BCCIPQ9P287 314 aaKnown RBP eCLIP8.76□□□□□ -1.01
TPM1-213ENST00000558400 NCDNQ9UBB6 729 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 CLEC4EQ9ULY5 219 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 SMG5Q9UPR3 1016 aaKnown RBP8.76□□□□□ -1.01
TPM1-213ENST00000558400 STON1Q9Y6Q2 735 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 WDR87Q6ZQQ6 2873 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 ITIH6Q6UXX5 1313 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 ATG2BQ96BY7 2078 aa8.76□□□□□ -1.01
TPM1-213ENST00000558400 A0A1W2PQF6 199 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 TCRBV21S2A2A0A5A6 115 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 C2CD4BA6NLJ0 364 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 DRGXA6NNA5 263 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 RTN2O75298 545 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 FTLP02792 175 aaPredicted RBP8.75□□□□□ -1.01
TPM1-213ENST00000558400 SERPING1P05155 500 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 SRPRAP08240 638 aaKnown RBP8.75□□□□□ -1.01
TPM1-213ENST00000558400 TPM1P09493 284 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 MYBL1P10243 752 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms