RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 RNF139Q8WU17 664 aa19.07■□□□□ 0.64
ABCD4-228ENST00000557588 NDRG1Q92597 394 aaKnown RBP19.07■□□□□ 0.64
ABCD4-228ENST00000557588 TTC17Q96AE7 1141 aa19.07■□□□□ 0.64
ABCD4-228ENST00000557588 NEUROG2Q9H2A3 272 aa19.07■□□□□ 0.64
ABCD4-228ENST00000557588 CISHQ9NSE2 258 aa19.07■□□□□ 0.64
ABCD4-228ENST00000557588 SFMBT1Q9UHJ3 866 aa19.07■□□□□ 0.64
ABCD4-228ENST00000557588 TRAF3IP3Q9Y228 551 aa19.07■□□□□ 0.64
ABCD4-228ENST00000557588 J3QKU1 62 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 TULP2O00295 520 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 WNT9AO14904 365 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 XPO1O14980 1071 aaKnown RBP19.06■□□□□ 0.64
ABCD4-228ENST00000557588 MSI1O43347 362 aaKnown RBP19.06■□□□□ 0.64
ABCD4-228ENST00000557588 IGLV3-27P01718 113 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 ASLP04424 464 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 RXRGP48443 463 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 ST8SIA6P61647 398 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 PIK3R6Q5UE93 754 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 BSPRYQ5W0U4 402 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 RESP18Q5W5W9 173 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 EDEM1Q92611 657 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 MRGPRX3Q96LB0 322 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 TMEM8AQ9HCN3 771 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 FAM13BQ9NYF5 915 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 CLCA2Q9UQC9 943 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 NAV2Q8IVL1 2488 aa19.06■□□□□ 0.64
ABCD4-228ENST00000557588 IRAK2O43187 625 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 CALUO43852 315 aaPredicted RBP19.05■□□□□ 0.64
ABCD4-228ENST00000557588 TBL1XO60907 577 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 RNASEH2AO75792 299 aaKnown RBP19.05■□□□□ 0.64
ABCD4-228ENST00000557588 PDIA4P13667 645 aaKnown RBP19.05■□□□□ 0.64
ABCD4-228ENST00000557588 CKMT2P17540 419 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 GLDCP23378 1020 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 ADPRHP54922 357 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 CXADRP78310 365 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 INSM1Q01101 510 aaPredicted RBP19.05■□□□□ 0.64
ABCD4-228ENST00000557588 ADIGQ0VDE8 80 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 NFIL3Q16649 462 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 KMT5BQ4FZB7 885 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 SLC45A4Q5BKX6 768 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 FAM133BQ5BKY9 247 aaKnown RBP19.05■□□□□ 0.64
ABCD4-228ENST00000557588 MSANTD2Q6P1R3 559 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 MFN1Q8IWA4 741 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 DHX40Q8IX18 779 aaKnown RBP19.05■□□□□ 0.64
ABCD4-228ENST00000557588 CEP57L1Q8IYX8 460 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 SERAC1Q96JX3 654 aa19.05■□□□□ 0.64
ABCD4-228ENST00000557588 ITIH6Q6UXX5 1313 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 YJEFN3A6XGL0 299 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 E7ENQ6 273 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 TLR4O00206 839 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 LATO43561 262 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 ACTN4O43707 911 aaKnown RBP19.04■□□□□ 0.64
ABCD4-228ENST00000557588 NR2F2P24468 414 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 ACP1P24666 158 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 SLC6A4P31645 630 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 CSKP41240 450 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 CCDC173Q0VFZ6 552 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 GOLGA7BQ2TAP0 167 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 PROX2Q3B8N5 592 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 C9orf64Q5T6V5 341 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 RFWD3Q6PCD5 774 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 MMAAQ8IVH4 418 aaKnown RBP19.04■□□□□ 0.64
ABCD4-228ENST00000557588 AADATQ8N5Z0 425 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 FIBINQ8TAL6 211 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 TATDN2Q93075 761 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 WBP1Q96G27 269 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 PRICKLE1Q96MT3 831 aaPredicted RBP19.04■□□□□ 0.64
ABCD4-228ENST00000557588 IPO9Q96P70 1041 aaKnown RBP19.04■□□□□ 0.64
ABCD4-228ENST00000557588 OMDQ99983 421 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 MMRN2Q9H8L6 949 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 LRRC4Q9HBW1 653 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 ABCC13Q9NSE7 274 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 TSPAN16Q9UKR8 245 aa19.04■□□□□ 0.64
ABCD4-228ENST00000557588 INTS6Q9UL03 887 aaKnown RBP19.04■□□□□ 0.64
ABCD4-228ENST00000557588 KRT13P13646 458 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 GOT1P17174 413 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 SLC8A1P32418 973 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 GTF2H1P32780 548 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 SLC11A2P49281 568 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 MCCD1P59942 119 aaPredicted RBP19.03■□□□□ 0.64
ABCD4-228ENST00000557588 BST2Q10589 180 aaKnown RBP19.03■□□□□ 0.64
ABCD4-228ENST00000557588 BNIP3Q12983 259 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 NUGGCQ68CJ6 796 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 KRT39Q6A163 491 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 NAPEPLDQ6IQ20 393 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 SND1Q7KZF4 910 aaKnown RBP eCLIP19.03■□□□□ 0.64
ABCD4-228ENST00000557588 FAM186BQ8IYM0 893 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 SCML4Q8N228 414 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 HJURPQ8NCD3 748 aaPredicted RBP19.03■□□□□ 0.64
ABCD4-228ENST00000557588 SEMA4DQ92854 862 aa19.03■□□□□ 0.64
ABCD4-228ENST00000557588 TARSL2A2RTX5 802 aaKnown RBP19.02■□□□□ 0.64
ABCD4-228ENST00000557588 ADH1BP00325 375 aa19.02■□□□□ 0.64
ABCD4-228ENST00000557588 C5AR1P21730 350 aa19.02■□□□□ 0.64
ABCD4-228ENST00000557588 IQCHQ86VS3 1027 aa19.02■□□□□ 0.64
ABCD4-228ENST00000557588 SPATS2Q86XZ4 545 aaKnown RBP19.02■□□□□ 0.64
ABCD4-228ENST00000557588 UNC45BQ8IWX7 931 aa19.02■□□□□ 0.64
ABCD4-228ENST00000557588 SIX6OS1Q8N1H7 587 aa19.02■□□□□ 0.64
ABCD4-228ENST00000557588 MFSD2AQ8NA29 543 aa19.02■□□□□ 0.64
ABCD4-228ENST00000557588 ZNF248Q8NDW4 579 aa19.02■□□□□ 0.64
ABCD4-228ENST00000557588 KCTD13Q8WZ19 329 aa19.02■□□□□ 0.64
ABCD4-228ENST00000557588 AZIN2Q96A70 460 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms