RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 CUL4AQ13619 759 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 KCNJ12Q14500 433 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 BMT2Q1RMZ1 405 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 PROX2Q3B8N5 592 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 ZNF394Q53GI3 561 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 COLEC12Q5KU26 742 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 FAM26FQ5R3K3 315 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 SFMBT2Q5VUG0 894 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 TBC1D3GQ6DHY5 549 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 TBC1D3CQ6IPX1 549 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 SND1Q7KZF4 910 aaKnown RBP eCLIP8.39□□□□□ -1.07
PCNX1-215ENST00000557428 ADIPOR2Q86V24 386 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 UNC93AQ86WB7 457 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 ZC3H3Q8IXZ2 948 aaKnown RBP8.39□□□□□ -1.07
PCNX1-215ENST00000557428 TBC1D3Q8IZP1 549 aaPredicted RBP8.39□□□□□ -1.07
PCNX1-215ENST00000557428 LSMEM2Q8N112 164 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 ARHGAP18Q8N392 663 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 WFDC5Q8TCV5 224 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 PLEKHO2Q8TD55 490 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 RFFLQ8WZ73 363 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 TMA16Q96EY4 203 aaKnown RBP8.39□□□□□ -1.07
PCNX1-215ENST00000557428 HIC2Q96JB3 615 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 ARHGAP9Q9BRR9 750 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 ABCG4Q9H172 646 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 RSPH9Q9H1X1 276 aaPredicted RBP8.39□□□□□ -1.07
PCNX1-215ENST00000557428 VRTNQ9H8Y1 702 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 PNPLA8Q9NP80 782 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 CLIC5Q9NZA1 410 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.39□□□□□ -1.07
PCNX1-215ENST00000557428 IL17BQ9UHF5 180 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 SFMBT1Q9UHJ3 866 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 SCML1Q9UN30 329 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 DOCK9Q9BZ29 2069 aa8.39□□□□□ -1.07
PCNX1-215ENST00000557428 BOD1L1Q8NFC6 3051 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 ARID1BQ8NFD5 2236 aaPredicted RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 TRIM38O00635 465 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 MSI1O43347 362 aaKnown RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 IL1BP01584 269 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 SLC8A1P32418 973 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 MLLT3P42568 568 aaPredicted RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 ASPAP45381 313 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 CCR5P51681 352 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 AP3M2P53677 418 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 ADPRHP54922 357 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 SRSF1Q07955 248 aaKnown RBP eCLIP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 BECN1Q14457 450 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 SGSM1Q2NKQ1 1148 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 SGO2Q562F6 1265 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 PPP1R26Q5T8A7 1209 aaPredicted RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 RNF219Q5W0B1 726 aaPredicted RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 NAPEPLDQ6IQ20 393 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 RFWD3Q6PCD5 774 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 CCDC81Q6ZN84 652 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 PRPF39Q86UA1 669 aaKnown RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 SPATS2Q86XZ4 545 aaKnown RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 MFN1Q8IWA4 741 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 CRYBG2Q8N1P7 616 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 CARNMT1Q8N4J0 409 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 RNF139Q8WU17 664 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 NDRG1Q92597 394 aaKnown RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 EDEM1Q92611 657 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 INTS4Q96HW7 963 aaKnown RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 NT5C1AQ9BXI3 368 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 DUSP16Q9BY84 665 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 DPH1Q9BZG8 443 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 IMPG2Q9BZV3 1241 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 DNAI2Q9GZS0 605 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 SYNDIG1Q9H7V2 258 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 MMRN2Q9H8L6 949 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 POLR1BQ9H9Y6 1135 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 SATB2Q9UPW6 733 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 CA5BQ9Y2D0 317 aa8.38□□□□□ -1.07
PCNX1-215ENST00000557428 SRPRBQ9Y5M8 271 aaKnown RBP8.38□□□□□ -1.07
PCNX1-215ENST00000557428 A0A1B0GVM2 712 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 TYW5A2RUC4 315 aaKnown RBP8.37□□□□□ -1.07
PCNX1-215ENST00000557428 TTC34A8MYJ7 566 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 OPA1O60313 960 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 MAGEC1O60732 1142 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 HLA-DRAP01903 254 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 C4BPAP04003 597 aaKnown RBP8.37□□□□□ -1.07
PCNX1-215ENST00000557428 ALPPL2P10696 532 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 PDCP20941 246 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 CSKP41240 450 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 RXRGP48443 463 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 LSSP48449 732 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 ERVPABLB-1P60509 514 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 DLG4P78352 724 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 ZNF211Q13398 564 aaPredicted RBP8.37□□□□□ -1.07
PCNX1-215ENST00000557428 STAT4Q14765 748 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 EPM2AIP1Q7L775 607 aaPredicted RBP8.37□□□□□ -1.07
PCNX1-215ENST00000557428 KANSL1Q7Z3B3 1105 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 CCDC117Q8IWD4 279 aaPredicted RBP8.37□□□□□ -1.07
PCNX1-215ENST00000557428 FAM217AQ8IXS0 508 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 CACTIN-AS1Q8N1I8 211 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 STK40Q8N2I9 435 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 AADATQ8N5Z0 425 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.37□□□□□ -1.07
PCNX1-215ENST00000557428 MFSD2AQ8NA29 543 aa8.37□□□□□ -1.07
PCNX1-215ENST00000557428 ZNF507Q8TCN5 953 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms