RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 FBXL12Q9NXK8 326 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 NLGN3Q9NZ94 848 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 SUN2Q9UH99 717 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 SERTAD1Q9UHV2 236 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 MKL2Q9ULH7 1088 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 CACNA1DQ01668 2161 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 PLXND1Q9Y4D7 1925 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CELSR2Q9HCU4 2923 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 RP1L1Q8IWN7 2480 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 A0A1W2PQ27 194 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 A0A1W2PQ64 194 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 A0A1W2PQC6 194 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CPED1A4D0V7 1026 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 FFAR2O15552 330 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 NEMFO60524 1076 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CLDN1O95832 211 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CYBBP04839 570 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 JMJD7P0C870 316 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 TGM2P21980 687 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 SCP2P22307 547 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CD82P27701 267 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CDC25AP30304 524 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CHKAP35790 457 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 UQCRFS1P47985 274 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 LIG4P49917 911 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 MLLT10P55197 1068 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 POU5F1Q01860 360 aaKnown RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CYP27A1Q02318 531 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 ZNF177Q13360 481 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 SEPT6Q14141 434 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 DHX8Q14562 1220 aaKnown RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 NPY5RQ15761 445 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 GEN1Q17RS7 908 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 BMT2Q1RMZ1 405 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 FNDC3BQ53EP0 1204 aaKnown RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 LACTB2Q53H82 288 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 SNX30Q5VWJ9 437 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 HAUS3Q68CZ6 603 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 RSRC2Q7L4I2 434 aaKnown RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 RAB11FIP2Q7L804 512 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 DPH6Q7L8W6 267 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 PRPF39Q86UA1 669 aaKnown RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 NT5DC4Q86YG4 428 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 ADGRF2Q8IZF7 708 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 NUP93Q8N1F7 819 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 BRF1Q92994 677 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 BHMTQ93088 406 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 FBXO32Q969P5 355 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 OMDQ99983 421 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 TIPINQ9BVW5 301 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 SRRTQ9BXP5 876 aaKnown RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 SLC2A11Q9BYW1 496 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 LSG1Q9H089 658 aaKnown RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 TMEM245Q9H330 911 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 ZNF395Q9H8N7 513 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 EBF2Q9HAK2 575 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 PRDM8Q9NQV8 689 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 KLHL11Q9NVR0 708 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 PLK2Q9NYY3 685 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CHORDC1Q9UHD1 332 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 CDH9Q9ULB4 789 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 L1RE1Q9UN81 338 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 ZNF510Q9Y2H8 683 aa6.03□□□□□ -1.44
ATXN3-245ENST00000556958 R3HCC1Q9Y3T6 440 aaKnown RBP6.03□□□□□ -1.44
ATXN3-245ENST00000556958 SLC12A8A0AV02 714 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 EME2A4GXA9 379 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-245ENST00000556958 PRR19A6NJB7 356 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 SHISA8B8ZZ34 492 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 F8VP50 259 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 MEN1O00255 615 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 GABRDO14764 452 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 WNT9AO14904 365 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 SCAMP1O15126 338 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 HIP1RO75146 1068 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 PENKP01210 267 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-245ENST00000556958 UGT1A5P35504 534 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 ATP5C1P36542 298 aaKnown RBP6.02□□□□□ -1.45
ATXN3-245ENST00000556958 IFRD2Q12894 506 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-245ENST00000556958 SRSF6Q13247 344 aaKnown RBP6.02□□□□□ -1.45
ATXN3-245ENST00000556958 SPIDRQ14159 915 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 ECM1Q16610 540 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 ZXDCQ2QGD7 858 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-245ENST00000556958 TTC22Q5TAA0 569 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 Q6ZUG5 572 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 VASH2Q86V25 355 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 CD163Q86VB7 1156 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 TOP6BLQ8N6T0 577 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 TMEM161BQ8NDZ6 487 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 MYLPFQ96A32 169 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 KLHDC7BQ96G42 594 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 ABHD17AQ96GS6 310 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 PIWIL1Q96J94 861 aaKnown RBP6.02□□□□□ -1.45
ATXN3-245ENST00000556958 SYT15Q9BQS2 421 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 MSTO1Q9BUK6 570 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 SLC12A9Q9BXP2 914 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 NEUROG2Q9H2A3 272 aa6.02□□□□□ -1.45
ATXN3-245ENST00000556958 PABPC3Q9H361 631 aaKnown RBP6.02□□□□□ -1.45
ATXN3-245ENST00000556958 SUV39H2Q9H5I1 410 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms