RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 GPC5P78333 572 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 PITX1P78337 314 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 DAB2P98082 770 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 ITIH3Q06033 890 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 ZNF252P-AS1Q0IIN9 211 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 KIF5AQ12840 1032 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 MAMLD1Q13495 774 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 KCNC3Q14003 757 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 RAB33AQ14088 237 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 SMC1AQ14683 1233 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 STILQ15468 1287 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 NFE2Q16621 373 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 MSMPQ1L6U9 139 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 CES5AQ6NT32 575 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 FDX2Q6P4F2 183 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 LILRA6Q6PI73 481 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 NXPE4Q6UWF7 544 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 OLFML1Q6UWY5 402 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 C4orf50Q6ZRC1 276 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 BHLHA9Q7RTU4 235 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 TMEM110Q86TL2 294 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 FMNL3Q8IVF7 1028 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 SLC35F6Q8N357 371 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 MRPL43Q8N983 215 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 SLC35G2Q8TBE7 412 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 SLC22A17Q8WUG5 538 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 CASP10Q92851 521 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 C18orf8Q96DM3 657 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 SMARCD1Q96GM5 515 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 NUP85Q9BW27 656 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 ADAM7Q9H2U9 754 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 SYNCQ9H7C4 482 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 NMUR1Q9HB89 426 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 ZFYVE1Q9HBF4 777 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 LRRC4Q9HBW1 653 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 CSNK1G1Q9HCP0 422 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 NGRNQ9NPE2 291 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 DMAP1Q9NPF5 467 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 RRAGDQ9NQL2 400 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 CTTNBP2NLQ9P2B4 639 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 AFF4Q9UHB7 1163 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 NUDT5Q9UKK9 219 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 PACSIN2Q9UNF0 486 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 MAGED2Q9UNF1 606 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 LZTS1Q9Y250 596 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 HIF3AQ9Y2N7 669 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 YIPF1Q9Y548 306 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 NLRC5Q86WI3 1866 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 USP34Q70CQ2 3546 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 CACNA1AO00555 2505 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 GRID2IPA4D2P6 1211 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 C2CD4DB7Z1M9 353 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 MDM4O15151 490 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 ZSCAN12O43309 604 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 BUB1BO60566 1050 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 RFPL2O75678 378 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 PALMO75781 387 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 IPO7O95373 1038 aaKnown RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 FTCDO95954 541 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 CALB1P05937 261 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 FYNP06241 537 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 TNNT1P13805 278 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 ATF2P15336 505 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 GJA1P17302 382 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 AOC1P19801 751 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 SP100P23497 879 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 MSNP26038 577 aaKnown RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 GSTT1P30711 240 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 RFC1P35251 1148 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 ADMP35318 185 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 FLT3P36888 993 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 MTHFRP42898 656 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 GABRB2P47870 512 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 DNA2P51530 1060 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 SLC5A3P53794 718 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 ATXN1P54253 815 aaKnown RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 NAP1L1P55209 391 aaKnown RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 DAOAP59103 153 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 NTHL1P78549 312 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 SLC6A3Q01959 620 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 PCDH1Q08174 1060 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 TWF1Q12792 350 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 PLD1Q13393 1074 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 MESDQ14696 234 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 ANGPT1Q15389 498 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 MAPRE1Q15691 268 aaKnown RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 C15orf59Q2T9L4 293 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 CFAP221Q4G0U5 840 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 ARHGAP29Q52LW3 1261 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 RAB41Q5JT25 222 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 ZNF569Q5MCW4 686 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 ATAT1Q5SQI0 421 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 C10orf76Q5T2E6 689 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 FAM102AQ5T9C2 384 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 LIN9Q5TKA1 542 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 OTUD1Q5VV17 481 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-244ENST00000556898 SYPL2Q5VXT5 272 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 PLEKHA7Q6IQ23 1121 aa5.54□□□□□ -1.52
ATXN3-244ENST00000556898 DNAJC24Q6P3W2 148 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms