RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SLFN14P0C7P3 912 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3HP0C7X1 549 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 ACP1P24666 158 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 SLC8A1P32418 973 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 HNRNPA1L2Q32P51 320 aaKnown RBP14.48□□□□□ -0.09
ACTN1-219ENST00000556432 PKDCCQ504Y2 493 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3GQ6DHY5 549 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3CQ6IPX1 549 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 NAPEPLDQ6IQ20 393 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 SND1Q7KZF4 910 aaKnown RBP eCLIP14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3Q8IZP1 549 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-219ENST00000556432 CACTIN-AS1Q8N1I8 211 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TMC2Q8TDI7 906 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 EDEM1Q92611 657 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 IPO9Q96P70 1041 aaKnown RBP14.48□□□□□ -0.09
ACTN1-219ENST00000556432 ULBP1Q9BZM6 244 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 ERVMER34-1Q9H9K5 563 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 APOBEC3GQ9HC16 384 aaKnown RBP14.48□□□□□ -0.09
ACTN1-219ENST00000556432 FRMD4BQ9Y2L6 1034 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 PIEZO2Q9H5I5 2752 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 SIGLEC6O43699 453 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 WISP1O95388 367 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 LATS1O95835 1130 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 NR3C1P04150 777 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 ASLP04424 464 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 KRT10P13645 584 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 GOT1P17174 413 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 CSKP41240 450 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 RXRGP48443 463 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 ADPRHP54922 357 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 PROX2Q3B8N5 592 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 KIAA0907Q7Z7F0 614 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-219ENST00000556432 CCDC117Q8IWD4 279 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-219ENST00000556432 LSMEM2Q8N112 164 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 ZNF557Q8N988 423 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-219ENST00000556432 HIC2Q96JB3 615 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 DEPDC7Q96QD5 511 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.47□□□□□ -0.09
ACTN1-219ENST00000556432 BACH2Q9BYV9 841 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 MAGEF1Q9HAY2 307 aa14.47□□□□□ -0.09
ACTN1-219ENST00000556432 TPX2Q9ULW0 747 aaKnown RBP14.47□□□□□ -0.09
ACTN1-219ENST00000556432 MORC2Q9Y6X9 1032 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-219ENST00000556432 TYW5A2RUC4 315 aaKnown RBP14.46□□□□□ -0.09
ACTN1-219ENST00000556432 TTC34A8MYJ7 566 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 TRIM38O00635 465 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 IKBKBO14920 756 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 SPTLC2O15270 562 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 MAGEC1O60732 1142 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 USP12O75317 370 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 IL1BP01584 269 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 TRIM49P0CI25 452 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 TRIM49CP0CI26 452 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 MAT2AP31153 395 aaKnown RBP14.46□□□□□ -0.09
ACTN1-219ENST00000556432 AFMP43652 599 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 GCLMP48507 274 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 SLC11A2P49281 568 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 PPP2CBP62714 309 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 PPP2CAP67775 309 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 VAC14Q08AM6 782 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 CDH18Q13634 790 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 RAB41Q5JT25 222 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 C9orf64Q5T6V5 341 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 RNF219Q5W0B1 726 aaPredicted RBP14.46□□□□□ -0.09
ACTN1-219ENST00000556432 TMC6Q7Z403 805 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 PRPF39Q86UA1 669 aaKnown RBP14.46□□□□□ -0.09
ACTN1-219ENST00000556432 SPATS2Q86XZ4 545 aaKnown RBP14.46□□□□□ -0.09
ACTN1-219ENST00000556432 SIX6OS1Q8N1H7 587 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 STK40Q8N2I9 435 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 CARNMT1Q8N4J0 409 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 AADATQ8N5Z0 425 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 MFSD2AQ8NA29 543 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 TAS1R2Q8TE23 839 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 LRRC4Q9HBW1 653 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 EXOC1Q9NV70 894 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 DMAC2Q9NW81 257 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 STOML2Q9UJZ1 356 aa14.46□□□□□ -0.09
ACTN1-219ENST00000556432 ARID1BQ8NFD5 2236 aaPredicted RBP14.46□□□□□ -0.1
ACTN1-219ENST00000556432 EDDM13A0A1B0GTR0 161 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 GOLGA6L7A0A1B0GV03 622 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 PVALEFA0A1B0GWK0 134 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 POLR2DO15514 142 aaKnown RBP14.45□□□□□ -0.1
ACTN1-219ENST00000556432 FFAR2O15552 330 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 ADH1BP00325 375 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 SYT1P21579 422 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 VAMP7P51809 220 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 ADIGQ0VDE8 80 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 PTPN13Q12923 2485 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 ZNF211Q13398 564 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-219ENST00000556432 CUL4BQ13620 913 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 STAT4Q14765 748 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 GOLGA7BQ2TAP0 167 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 C8orf34Q49A92 452 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 MPP7Q5T2T1 576 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 PIK3R6Q5UE93 754 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 BSPRYQ5W0U4 402 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 KANSL1Q7Z3B3 1105 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 SLC9A9Q8IVB4 645 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 HJURPQ8NCD3 748 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-219ENST00000556432 TTC17Q96AE7 1141 aa14.45□□□□□ -0.1
ACTN1-219ENST00000556432 MED8Q96G25 268 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms