RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 HERVK_113Q902F9 699 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 FAM168AQ92567 244 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 ALG3Q92685 438 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 GOLGA1Q92805 767 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 FAM149B1Q96BN6 582 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 TMEM169Q96HH4 297 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 RPGRIP1Q96KN7 1286 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 PGLYRP2Q96PD5 576 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 NCAPGQ9BPX3 1015 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.35
HIF1A-208ENST00000556237 CNPY3Q9BT09 278 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 RHOBTB2Q9BYZ6 727 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 ULBP1Q9BZM6 244 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 CARD9Q9H257 536 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 RC3H2Q9HBD1 1191 aaKnown RBP6.62□□□□□ -1.35
HIF1A-208ENST00000556237 CSNK1G1Q9HCP0 422 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 DMAP1Q9NPF5 467 aaPredicted RBP6.62□□□□□ -1.35
HIF1A-208ENST00000556237 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.62□□□□□ -1.35
HIF1A-208ENST00000556237 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.62□□□□□ -1.35
HIF1A-208ENST00000556237 PCSK1NQ9UHG2 260 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 TLR6Q9Y2C9 796 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 PCDHB12Q9Y5F1 795 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 MRPL42Q9Y6G3 142 aaKnown RBP6.62□□□□□ -1.35
HIF1A-208ENST00000556237 SLC4A7Q9Y6M7 1214 aa6.62□□□□□ -1.35
HIF1A-208ENST00000556237 V9GYY5 206 aaPredicted RBP6.62□□□□□ -1.35
HIF1A-208ENST00000556237 CCDC85CA6NKD9 419 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 PGRMC1O00264 195 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 KRIT1O00522 736 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 CAPN9O14815 690 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 CTIFO43310 598 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 PSTPIP1O43586 416 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 TBC1D4O60343 1298 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 GJB5O95377 273 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 TRUB2O95900 331 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 ZBED1O96006 694 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 FGGP02679 453 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 SOD2P04179 222 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 GLI1P08151 1106 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 TFE3P19532 575 aaPredicted RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 MIPP30301 263 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 SDC4P31431 198 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 OR1D2P34982 312 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 GTF2F1P35269 517 aaKnown RBP eCLIP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 FLT3P36888 993 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 MATKP42679 507 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 DAOAP59103 153 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 YWHAZP63104 245 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 KRT17Q04695 432 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 ADCY1Q08828 1119 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 C2orf54Q08AI8 447 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 SMARCB1Q12824 385 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 IFRD2Q12894 506 aaPredicted RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 DUSP4Q13115 394 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 GPR17Q13304 367 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 SMC1AQ14683 1233 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 LRRC14Q15048 493 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 LLGL1Q15334 1064 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 CLUL1Q15846 466 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 PSMD5Q16401 504 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 DDR2Q16832 855 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 CDO1Q16878 200 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 C15orf59Q2T9L4 293 aaPredicted RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 FBLN7Q53RD9 439 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 RAB41Q5JT25 222 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 RTP2Q5QGT7 225 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 LRRC38Q5VT99 294 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 DCAF12L1Q5VU92 463 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 SDHAF4Q5VUM1 108 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 TRNP1Q6NT89 227 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 PSRC1Q6PGN9 363 aaPredicted RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 VSTM1Q6UX27 236 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 RSRC2Q7L4I2 434 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 SLC26A9Q7LBE3 791 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 ARCQ7LC44 396 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 ADAT2Q7Z6V5 191 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 DDX53Q86TM3 631 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 SLC13A5Q86YT5 568 aaPredicted RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 CCDC50Q8IVM0 306 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 NUP93Q8N1F7 819 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 MMGT1Q8N4V1 131 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 ARFGAP1Q8N6T3 406 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 PHC3Q8NDX5 983 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 PHOSPHO2Q8TCD6 241 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 FUBP3Q96I24 572 aaKnown RBP eCLIP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 PIWIL1Q96J94 861 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 RNPC3Q96LT9 517 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 CFAP57Q96MR6 1250 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 FANCD2OSQ96PS1 177 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 NAP1L3Q99457 506 aaPredicted RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 DDX23Q9BUQ8 820 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 AP1M1Q9BXS5 423 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 MTIF3Q9H2K0 278 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 ZWILCHQ9H900 591 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 CNGB3Q9NQW8 809 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 CHST7Q9NS84 486 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 TMEM30AQ9NV96 361 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 DDX56Q9NY93 547 aaKnown RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 KIAA1522Q9P206 1035 aaPredicted RBP6.61□□□□□ -1.35
HIF1A-208ENST00000556237 INSL6Q9Y581 213 aa6.61□□□□□ -1.35
HIF1A-208ENST00000556237 BACE2Q9Y5Z0 518 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms