RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 KREMEN1Q96MU8 473 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 CAMK1GQ96NX5 476 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 SLC4A5Q9BY07 1137 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 INTS2Q9H0H0 1204 aaKnown RBP11.93□□□□□ -0.5
LRP1-209ENST00000555941 C6orf106Q9H6K1 298 aaPredicted RBP11.93□□□□□ -0.5
LRP1-209ENST00000555941 ST7Q9NRC1 585 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 STIM2Q9P246 746 aa11.93□□□□□ -0.5
LRP1-209ENST00000555941 TPX2Q9ULW0 747 aaKnown RBP11.93□□□□□ -0.5
LRP1-209ENST00000555941 A0A1B0GVT2 93 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 SRRM3A6NNA2 597 aaPredicted RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 CAPN9O14815 690 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 LUC7L3O95232 432 aaKnown RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 APOEP02649 317 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 SLC2A3P11169 496 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 KRT5P13647 590 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 CSKP41240 450 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 CSNK1EP49674 416 aaKnown RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 RPS24P62847 133 aaKnown RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 YWHAZP63104 245 aaKnown RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 BNC1Q01954 994 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 MTA1Q13330 715 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 SLC12A1Q13621 1099 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 CDH18Q13634 790 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 CACUL1Q86Y37 369 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 ZNF366Q8N895 744 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 WFDC5Q8TCV5 224 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 SETD7Q8WTS6 366 aaKnown RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 ZNF606Q8WXB4 792 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 SNX19Q92543 992 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 FAM149B1Q96BN6 582 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 BIRC7Q96CA5 298 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 MYO19Q96H55 970 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 BTN2A3PQ96KV6 586 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 PRICKLE1Q96MT3 831 aaPredicted RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 SRRTQ9BXP5 876 aaKnown RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 PABPC3Q9H361 631 aaKnown RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 THAP9Q9H5L6 903 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 POPDC2Q9HBU9 364 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 TM9SF3Q9HD45 589 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 UBE2TQ9NPD8 197 aaPredicted RBP11.92□□□□□ -0.5
LRP1-209ENST00000555941 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.92□□□□□ -0.5
LRP1-209ENST00000555941 SLC12A6Q9UHW9 1150 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 CTNND2Q9UQB3 1225 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 NAALADL1Q9UQQ1 740 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 KNL1Q8NG31 2342 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 NUMA1Q14980 2115 aa11.92□□□□□ -0.5
LRP1-209ENST00000555941 PCDHGA12O60330 932 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 GLI1P08151 1106 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 OXCT1P55809 520 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 ECT2LQ008S8 904 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 KIF19Q2TAC6 998 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 DCAF6Q58WW2 860 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 TTC39BQ5VTQ0 682 aaPredicted RBP11.91□□□□□ -0.5
LRP1-209ENST00000555941 KIAA0895LQ68EN5 471 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 DENND1BQ6P3S1 775 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 CARNMT1Q8N4J0 409 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 BAHD1Q8TBE0 780 aaPredicted RBP11.91□□□□□ -0.5
LRP1-209ENST00000555941 IGSF8Q969P0 613 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 SKA1Q96BD8 255 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 MRGPRX3Q96LB0 322 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 PPP1R9BQ96SB3 815 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
LRP1-209ENST00000555941 IL21RQ9HBE5 538 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 FBXL12Q9NXK8 326 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 TJP2Q9UDY2 1190 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 ADAMTS1Q9UHI8 967 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 INTS6Q9UL03 887 aaKnown RBP11.91□□□□□ -0.5
LRP1-209ENST00000555941 FZD4Q9ULV1 537 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 ERVW-1Q9UQF0 538 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 ANKRD6Q9Y2G4 727 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 FNDC3AQ9Y2H6 1198 aaKnown RBP11.91□□□□□ -0.5
LRP1-209ENST00000555941 CABIN1Q9Y6J0 2220 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 DMXL2Q8TDJ6 3036 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 ANKRD11Q6UB99 2663 aaPredicted RBP11.91□□□□□ -0.5
LRP1-209ENST00000555941 PKD1L2Q7Z442 2459 aa11.91□□□□□ -0.5
LRP1-209ENST00000555941 ITIH6Q6UXX5 1313 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 EDDM13A0A1B0GTR0 161 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 GTPBP10A4D1E9 387 aaKnown RBP11.9□□□□□ -0.5
LRP1-209ENST00000555941 LRRC72A6NJI9 287 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 KCNU1A8MYU2 1149 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 BIN1O00499 593 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 PAPSS1O43252 624 aaPredicted RBP11.9□□□□□ -0.5
LRP1-209ENST00000555941 SIN3BO75182 1162 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 FSBPO95073 299 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 LETM1O95202 739 aaPredicted RBP11.9□□□□□ -0.5
LRP1-209ENST00000555941 TRUB2O95900 331 aaKnown RBP11.9□□□□□ -0.5
LRP1-209ENST00000555941 CALCAP01258 141 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 IGLV3-25P01717 112 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 GNA15P30679 374 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 NNMTP40261 264 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 STX17P56962 302 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 SNX16P57768 344 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 RACK1P63244 317 aaKnown RBP11.9□□□□□ -0.5
LRP1-209ENST00000555941 SULT2A1Q06520 285 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 EIF4EBP2Q13542 120 aaPredicted RBP11.9□□□□□ -0.5
LRP1-209ENST00000555941 CST6Q15828 149 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 INAVAQ3KP66 663 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 FSCBQ5H9T9 825 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 PITRM1Q5JRX3 1037 aa11.9□□□□□ -0.5
LRP1-209ENST00000555941 C9orf64Q5T6V5 341 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms