RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 REXO1L1PQ8IX06 675 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 ETFBKMTQ8IXQ9 262 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 CFAP52Q8N1V2 620 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 PYROXD2Q8N2H3 581 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 EDAQ92838 391 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 MYEOVQ96EZ4 313 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 GOLPH3Q9H4A6 298 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 DDX56Q9NY93 547 aaKnown RBP14.73□□□□□ -0.05
CHD8-208ENST00000555301 DONSONQ9NYP3 566 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 STIM2Q9P246 746 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 DEC1Q9P2X7 70 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 AMFRQ9UKV5 643 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 CA14Q9ULX7 337 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 CAPN6Q9Y6Q1 641 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 CCDC66A2RUB6 948 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 H3BRJ5 948 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 EEF2KO00418 725 aaKnown RBP14.72□□□□□ -0.05
CHD8-208ENST00000555301 FGF10O15520 208 aaPredicted RBP14.72□□□□□ -0.05
CHD8-208ENST00000555301 TULP3O75386 442 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 LUC7L3O95232 432 aaKnown RBP14.72□□□□□ -0.05
CHD8-208ENST00000555301 EPHB2P29323 1055 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 HOXC13P31276 330 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 GJC1P36383 396 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 ARL4AP40617 200 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 HCAR3P49019 387 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 CDH6P55285 790 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 OXCT1P55809 520 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 TPI1P60174 286 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 SIGLEC14Q08ET2 396 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 CDH18Q13634 790 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 PDK2Q15119 407 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 GAB4Q2WGN9 574 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 ZNF852Q6ZMS4 543 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 TPRG1Q6ZUI0 275 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 SUGP1Q8IWZ8 645 aaKnown RBP14.72□□□□□ -0.05
CHD8-208ENST00000555301 CCAR2Q8N163 923 aaKnown RBP14.72□□□□□ -0.05
CHD8-208ENST00000555301 NAT16Q8N8M0 369 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 KCTD6Q8NC69 237 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 TRIM58Q8NG06 486 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 FAM71BQ8TC56 605 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 CD101Q93033 1021 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 KCTD15Q96SI1 283 aaPredicted RBP14.72□□□□□ -0.05
CHD8-208ENST00000555301 P2RY13Q9BPV8 354 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 MAGEB5Q9BZ81 275 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 CATSPERBQ9H7T0 1116 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 DNAJC17Q9NVM6 304 aaKnown RBP14.72□□□□□ -0.05
CHD8-208ENST00000555301 TRMT1Q9NXH9 659 aaKnown RBP14.72□□□□□ -0.05
CHD8-208ENST00000555301 RCOR3Q9P2K3 495 aaPredicted RBP14.72□□□□□ -0.05
CHD8-208ENST00000555301 FBXO10Q9UK96 956 aa14.72□□□□□ -0.05
CHD8-208ENST00000555301 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.71□□□□□ -0.05
CHD8-208ENST00000555301 MIF4GDA9UHW6 222 aaKnown RBP14.71□□□□□ -0.05
CHD8-208ENST00000555301 H0Y626 953 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 DAPK3O43293 454 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 CNTN5O94779 1100 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 TNNT1P13805 278 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 RHOQP17081 205 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 CTNNA1P35221 906 aaKnown RBP14.71□□□□□ -0.05
CHD8-208ENST00000555301 OPRD1P41143 372 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 DGKGP49619 791 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 ZNF177Q13360 481 aaPredicted RBP14.71□□□□□ -0.05
CHD8-208ENST00000555301 ATP13A4Q4VNC1 1196 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 ALFQ53S48 1182 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 GRAMD4Q6IC98 578 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 RFX8Q6ZV50 586 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 NUDT18Q6ZVK8 323 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 NT5DC3Q86UY8 548 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 C12orf40Q86WS4 652 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 VSIG1Q86XK7 387 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 SIX5Q8N196 739 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 CARNMT1Q8N4J0 409 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 FIBINQ8TAL6 211 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 FAM3CQ92520 227 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 CHFRQ96EP1 664 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 P2RY11Q96G91 374 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 PNKPQ96T60 521 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 ZNF670Q9BS34 389 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 PCDH18Q9HCL0 1135 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 KCND1Q9NSA2 647 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 MPP6Q9NZW5 540 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 SLC27A6Q9Y2P4 619 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 MRPS17Q9Y2R5 130 aaKnown RBP14.71□□□□□ -0.05
CHD8-208ENST00000555301 PCDHA3Q9Y5H8 950 aa14.71□□□□□ -0.05
CHD8-208ENST00000555301 KIF26AQ9ULI4 1882 aaPredicted RBP14.7□□□□□ -0.06
CHD8-208ENST00000555301 KRBA1A5PL33 1030 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 WASH4PA8MWX3 477 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 ZNF487B1APH4 448 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 KIF5CO60282 957 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 FTCDO95954 541 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 KRT1P04264 644 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 GOT1P17174 413 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 KDELR1P24390 212 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 MSNP26038 577 aaKnown RBP14.7□□□□□ -0.06
CHD8-208ENST00000555301 CTNNA2P26232 953 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 SLC6A11P48066 632 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 MAPKAPK2P49137 400 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 GALK1P51570 392 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 ARSEP51690 589 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 STARD6P59095 220 aa14.7□□□□□ -0.06
CHD8-208ENST00000555301 GRSF1Q12849 480 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHD8-208ENST00000555301 SLC12A1Q13621 1099 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms