RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 GATA6Q92908 595 aa11.51□□□□□ -0.57
SRP54-205ENST00000554803 LRRC37BQ96QE4 947 aa11.51□□□□□ -0.57
SRP54-205ENST00000554803 ADAM33Q9BZ11 813 aa11.51□□□□□ -0.57
SRP54-205ENST00000554803 RSAD1Q9HA92 442 aa11.51□□□□□ -0.57
SRP54-205ENST00000554803 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.51□□□□□ -0.57
SRP54-205ENST00000554803 RXFP3Q9NSD7 469 aa11.51□□□□□ -0.57
SRP54-205ENST00000554803 WDR35Q9P2L0 1181 aa11.51□□□□□ -0.57
SRP54-205ENST00000554803 PSMC3IPQ9P2W1 217 aaPredicted RBP11.51□□□□□ -0.57
SRP54-205ENST00000554803 NDRG2Q9UN36 371 aaKnown RBP11.51□□□□□ -0.57
SRP54-205ENST00000554803 PRG3Q9Y2Y8 225 aaPredicted RBP11.51□□□□□ -0.57
SRP54-205ENST00000554803 PCNX2A6NKB5 2137 aa11.51□□□□□ -0.57
SRP54-205ENST00000554803 ASCC3Q8N3C0 2202 aaKnown RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 CHURC1-FNTBB4DL54 471 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 MAN2B1O00754 1011 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 ATMINO43313 823 aaPredicted RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 ECI2O75521 394 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 KRT7P08729 469 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 HNRNPA1P09651 372 aaKnown RBP eCLIP11.5□□□□□ -0.57
SRP54-205ENST00000554803 ZNF806P0C7X5 589 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 TROVE2P10155 538 aaKnown RBP eCLIP11.5□□□□□ -0.57
SRP54-205ENST00000554803 MCF2P10911 925 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 ACO1P21399 889 aaKnown RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 MMP8P22894 467 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 GNA15P30679 374 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 CHKAP35790 457 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 OR1G1P47890 313 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 CXCL12P48061 93 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 FNTBP49356 437 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 ZNF132P52740 706 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 SATB1Q01826 763 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 SRSF5Q13243 272 aaKnown RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 ZRSR2Q15696 482 aaKnown RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 SPRED3Q2MJR0 410 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 FAM133BQ5BKY9 247 aaKnown RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 PSAPL1Q6NUJ1 521 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 NOTUMQ6P988 496 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 MRPL10Q7Z7H8 261 aaKnown RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 TBC1D1Q86TI0 1168 aaPredicted RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 FAM160A2Q8N612 972 aaPredicted RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 ATP11CQ8NB49 1132 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 TMEM35BQ8NCS4 154 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 ITFG1Q8TB96 612 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 LRRC8CQ8TDW0 803 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 DENND1AQ8TEH3 1009 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 DNASE1L2Q92874 299 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 TOPORSQ9NS56 1045 aaPredicted RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 LNPEPQ9UIQ6 1025 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 FBXW11Q9UKB1 542 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 CPSF3Q9UKF6 684 aaKnown RBP11.5□□□□□ -0.57
SRP54-205ENST00000554803 PCDHGC3Q9UN70 934 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 PTPRJQ12913 1337 aa11.5□□□□□ -0.57
SRP54-205ENST00000554803 TMEM191CA6NGB0 347 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 TGDSO95455 350 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 POMCP01189 267 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 TMEM191BP0C7N4 346 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 CXCL8P10145 99 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 TNNI1P19237 187 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 HOXA9P31269 272 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 CLNS1AP54105 237 aaKnown RBP11.49□□□□□ -0.57
SRP54-205ENST00000554803 CDK18Q07002 472 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 FOXC1Q12948 553 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 P3H1Q32P28 736 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 TFDP3Q5H9I0 405 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 FAM91A1Q658Y4 838 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 SLC27A1Q6PCB7 646 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 C4orf22Q6V702 233 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 LONP2Q86WA8 852 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 WDR49Q8IV35 697 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 TRIM42Q8IWZ5 723 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 NPAS3Q8IXF0 933 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 SRRM1Q8IYB3 904 aaKnown RBP11.49□□□□□ -0.57
SRP54-205ENST00000554803 COLGALT2Q8IYK4 626 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 HACE1Q8IYU2 909 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 TMEM130Q8N3G9 435 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 ZCCHC14Q8WYQ9 949 aaKnown RBP11.49□□□□□ -0.57
SRP54-205ENST00000554803 SLITRK1Q96PX8 696 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 MIS12Q9H081 205 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 VPS11Q9H270 941 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 CXCL16Q9H2A7 254 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 NXF3Q9H4D5 531 aaKnown RBP11.49□□□□□ -0.57
SRP54-205ENST00000554803 TRABDQ9H4I3 376 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 LMAN1LQ9HAT1 526 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 RBAKQ9NYW8 714 aaPredicted RBP11.49□□□□□ -0.57
SRP54-205ENST00000554803 HES2Q9Y543 173 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 PCDHB4Q9Y5E5 795 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 ACACAQ13085 2346 aa11.49□□□□□ -0.57
SRP54-205ENST00000554803 ATG2BQ96BY7 2078 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 MED7O43513 233 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 EDF1O60869 148 aaKnown RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 ATP2C2O75185 946 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 ZNF189O75820 626 aaPredicted RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 PAPSS2O95340 614 aaPredicted RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 GSTA2P09210 222 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 KRT15P19012 456 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 ARL4CP56559 192 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 GEMIN4P57678 1058 aaKnown RBP11.48□□□□□ -0.57
SRP54-205ENST00000554803 CREMQ03060 361 aa11.48□□□□□ -0.57
SRP54-205ENST00000554803 DSC1Q08554 894 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms