RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MED16Q9Y2X0 877 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 RNF114Q9Y508 228 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHGA9Q9Y5G4 932 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHGA8Q9Y5G5 932 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHGA7Q9Y5G6 932 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHGA6Q9Y5G7 932 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHGA3Q9Y5H0 932 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 TDRD15B5MCY1 1934 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 DNAH12Q6ZR08 3092 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PDCD11Q14690 1871 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 IGKV6-21A0A0C4DH24 114 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 VPS37CA5D8V6 355 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TRIM38O00635 465 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 MAGEB2O15479 319 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 MGEA5O60502 916 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 DNAJC8O75937 253 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 C22orf31O95567 290 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PSAPP07602 524 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 POU2F1P14859 743 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 DDX5P17844 614 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ALOX12P18054 663 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ARF4P18085 180 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 HOXA11P31270 313 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SREBF1P36956 1147 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ETV3P41162 512 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CETN2P41208 172 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 IRAK1P51617 712 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ALDH3A2P51648 485 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 GPC3P51654 580 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 VCPP55072 806 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ANTXR2P58335 489 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 BASP1P80723 227 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TUBA3CQ13748 450 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 EFTUD2Q15029 972 aaKnown RBP eCLIP2.81□□□□□ -1.963e-10■■■■□ 25.3
PRPF39-206ENST00000554429 CEP78Q5JTW2 689 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 FAM209BQ5JX69 171 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TBCELQ5QJ74 424 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 COX20Q5RI15 118 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 DCLRE1AQ6PJP8 1040 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 RSPO2Q6UXX9 243 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CYFIP1Q7L576 1253 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 OVCH2Q7RTZ1 564 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 FGD2Q7Z6J4 655 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ADGRG6Q86SQ4 1221 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 STK32CQ86UX6 486 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 LRRTM4Q86VH4 590 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CPOQ8IVL8 374 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 UNC45BQ8IWX7 931 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 NECAB1Q8N987 351 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 FAM71DQ8N9W8 422 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SMYD1Q8NB12 490 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SLC4A11Q8NBS3 891 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 B4GALNT2Q8NHY0 566 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 GDAP1Q8TB36 358 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 URGCPQ8TCY9 931 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 DDX1Q92499 740 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SYN2Q92777 582 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 MAP4K1Q92918 833 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CUL5Q93034 780 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PTP4A1Q93096 173 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 GFM2Q969S9 779 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 C18orf8Q96DM3 657 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 LENG8Q96PV6 779 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PLIN2Q99541 437 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 RTP3Q9BQQ7 232 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM175Q9BSA9 504 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 MAGEH1Q9H213 219 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ADAMTS10Q9H324 1103 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 NDST4Q9H3R1 872 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 C8orf33Q9H7E9 229 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ZFAND3Q9H8U3 227 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PARVGQ9HBI0 331 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SDHAF3Q9NRP4 125 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 FKBP14Q9NWM8 211 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TUBA8Q9NY65 449 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 NINJ2Q9NZG7 142 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 EMC3Q9P0I2 261 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SLC39A10Q9ULF5 831 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 LRFN2Q9ULH4 789 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PADI3Q9ULW8 664 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TRIM33Q9UPN9 1127 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 R3HDM2Q9Y2K5 976 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHGA1Q9Y5H4 931 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TNPO3Q9Y5L0 923 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 MYH15Q9Y2K3 1946 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CACNA1AO00555 2505 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 KIAA1549LQ6ZVL6 1849 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ATP8B3O60423 1300 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 A0A0U1RQK1 487 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC78A2IDD5 438 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF320A2RRD8 509 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 C2orf71A6NGG8 1288 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF891A8MT65 544 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 M0QZ92 97 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 EBAG9O00559 213 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SH2B2O14492 632 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PPEF2O14830 753 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 DHX15O43143 795 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 RRP8O43159 456 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms