RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ARSAP15289 507 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 GNSP15586 552 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 ATF4P18848 351 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-226ENST00000554350 POU3F2P20265 443 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-226ENST00000554350 PSMA5P28066 241 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 MYO1EQ12965 1108 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 NECTIN1Q15223 517 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 ANKRD1Q15327 319 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 CDSNQ15517 529 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 UGCGQ16739 394 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 SPDYCQ5MJ68 293 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 ACBD5Q5T8D3 534 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-226ENST00000554350 KIAA1614Q5VZ46 1190 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 MRM1Q6IN84 353 aaKnown RBP6.13□□□□□ -1.43
ATXN3-226ENST00000554350 CC2D1AQ6P1N0 951 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-226ENST00000554350 NOTUMQ6P988 496 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 SRGAP1Q7Z6B7 1085 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 TMPRSS12Q86WS5 348 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 TCEAL8Q8IYN2 117 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 ENGASEQ8NFI3 743 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 CCDC26Q8TAB7 109 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 OLIG1Q8TAK6 271 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 CD101Q93033 1021 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 PPP1R14AQ96A00 147 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 TRMT2BQ96GJ1 504 aaKnown RBP6.13□□□□□ -1.43
ATXN3-226ENST00000554350 FAM227BQ96M60 508 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 KRT23Q9C075 422 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 GAREM1Q9H706 876 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 MINDY3Q9H8M7 445 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 IL21RQ9HBE5 538 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 HPS4Q9NQG7 708 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 TM7SF3Q9NS93 570 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 DIAPH3Q9NSV4 1193 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 TBC1D22BQ9NU19 505 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 OBP2AQ9NY56 170 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 LIMCH1Q9UPQ0 1083 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 MAN2B2Q9Y2E5 1009 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 ATP6V1DQ9Y5K8 247 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 COL4A3BPQ9Y5P4 624 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 SNX14Q9Y5W7 946 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 ZMYM6O95789 1325 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 hCG_1642624A0A1W2PR95 340 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 TCRBV5S2A0A599 114 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 TCRBV21S2A2A0A5A6 115 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 C9orf118A6NHY6 69 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 SMAD7O15105 426 aaKnown RBP6.12□□□□□ -1.43
ATXN3-226ENST00000554350 FLRT2O43155 660 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 TNFSF14O43557 240 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 TADA3O75528 432 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 B3GAT3O94766 335 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 ABLIM3O94929 683 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 CER1O95813 267 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 HOXC12P31275 282 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 ECI1P42126 302 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 MATKP42679 507 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 HELZP42694 1942 aaKnown RBP6.12□□□□□ -1.43
ATXN3-226ENST00000554350 NT5C2P49902 561 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 CYP4A11Q02928 519 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 TARDBPQ13148 414 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATXN3-226ENST00000554350 KCNAB2Q13303 367 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 KRT32Q14532 448 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 CRY1Q16526 586 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 HS1BP3Q53T59 392 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 EMC4Q5J8M3 183 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 SYCP2LQ5T4T6 812 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 SLC36A4Q6YBV0 504 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 HEATR3Q7Z4Q2 680 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 ZNF589Q86UQ0 364 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-226ENST00000554350 CPA6Q8N4T0 437 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 TRIML1Q8N9V2 468 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 ZNF248Q8NDW4 579 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 GSTCDQ8NEC7 633 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 PPP1R9BQ96SB3 815 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATXN3-226ENST00000554350 ZDHHC5Q9C0B5 715 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 CDIP1Q9H305 208 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 FAM124BQ9H5Z6 455 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-226ENST00000554350 IFT122Q9HBG6 1241 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 PPP4R1LQ9P1A2 415 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 ST6GALNAC2Q9UJ37 374 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 MMP17Q9ULZ9 603 aa6.12□□□□□ -1.43
ATXN3-226ENST00000554350 CACNA1DQ01668 2161 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 INO80B-WBP1J3KQ70 363 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 IFIT3O14879 490 aaKnown RBP6.11□□□□□ -1.43
ATXN3-226ENST00000554350 KLK10O43240 276 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 TRAPPC3O43617 180 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 TSPAN1O60635 241 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 NDUFS2O75306 463 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 LETM1O95202 739 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-226ENST00000554350 KLF8O95600 359 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-226ENST00000554350 THP07101 528 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 SNRPB2P08579 225 aaKnown RBP6.11□□□□□ -1.43
ATXN3-226ENST00000554350 CALM1P0DP23 149 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 CALM2P0DP24 149 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 CALM3P0DP25 149 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 ELAVL4P26378 380 aaKnown RBP6.11□□□□□ -1.43
ATXN3-226ENST00000554350 GABRR2P28476 465 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 GJA4P35212 333 aa6.11□□□□□ -1.43
ATXN3-226ENST00000554350 SREBF1P36956 1147 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms