RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 E2F8A0AVK6 867 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 H0YCG3 227 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 GFRA2O00451 464 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 SLC28A2O43868 658 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 PCDHGA12O60330 932 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 PFKFB2O60825 505 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 OAS1P00973 400 aaKnown RBP7.28□□□□□ -1.24
ATXN3-224ENST00000554040 PIGRP01833 764 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 C1SP09871 688 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 NME2P22392 152 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 ACAT1P24752 427 aaKnown RBP7.28□□□□□ -1.24
ATXN3-224ENST00000554040 OXTRP30559 389 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 MAGEA11P43364 429 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 CSNK1EP49674 416 aaKnown RBP7.28□□□□□ -1.24
ATXN3-224ENST00000554040 LIG4P49917 911 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 MYL7Q01449 175 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 CCDC173Q0VFZ6 552 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 TARDBPQ13148 414 aaKnown RBP eCLIP7.28□□□□□ -1.24
ATXN3-224ENST00000554040 ORC2Q13416 577 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-224ENST00000554040 SV2CQ496J9 727 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 LCE1DQ5T752 114 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 FAM171BQ6P995 826 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 VSTM1Q6UX27 236 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 DENND5BQ6ZUT9 1274 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 UBE3DQ7Z6J8 389 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 DDX42Q86XP3 938 aaKnown RBP eCLIP7.28□□□□□ -1.24
ATXN3-224ENST00000554040 SPATA2LQ8IUW3 424 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-224ENST00000554040 SPACA3Q8IXA5 215 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 RNF214Q8ND24 703 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 MSTO1Q9BUK6 570 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 TM6SF1Q9BZW5 370 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 PDRG1Q9NUG6 133 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 USP36Q9P275 1121 aaKnown RBP7.28□□□□□ -1.24
ATXN3-224ENST00000554040 EIF2B4Q9UI10 523 aaKnown RBP7.28□□□□□ -1.24
ATXN3-224ENST00000554040 DCTN4Q9UJW0 460 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 L1RE1Q9UN81 338 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 SNX11Q9Y5W9 270 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 RAD54BQ9Y620 910 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 SCN1AP35498 2009 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 MYO9AB2RTY4 2548 aa7.28□□□□□ -1.24
ATXN3-224ENST00000554040 CEP192Q8TEP8 1941 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 KCNJ18B7U540 433 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 WASH3PC4AMC7 463 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 KCNK3O14649 394 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 HNRNPDLO14979 420 aaKnown RBP7.27□□□□□ -1.25
ATXN3-224ENST00000554040 BRINP1O60477 761 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 HUS1O60921 280 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 PAGE1O75459 146 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 CEACAM5P06731 702 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 MBL2P11226 248 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-224ENST00000554040 BMP6P22004 513 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 PCSK1P29120 753 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 ACTN2P35609 894 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 PNPLA4P41247 253 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 LHX1P48742 406 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 ACOT2P49753 483 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 AFF3P51826 1226 aaKnown RBP7.27□□□□□ -1.25
ATXN3-224ENST00000554040 NCKAP1LP55160 1127 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 CLDN6P56747 220 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 POU5F1Q01860 360 aaKnown RBP7.27□□□□□ -1.25
ATXN3-224ENST00000554040 RAD51AP2Q09MP3 1159 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 LY6DQ14210 128 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 IFI16Q16666 785 aaKnown RBP7.27□□□□□ -1.25
ATXN3-224ENST00000554040 CCDC142Q17RM4 750 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 ANO4Q32M45 955 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 TBC1D25Q3MII6 688 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 COLEC12Q5KU26 742 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 GRAMD4Q6IC98 578 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 C4orf50Q6ZRC1 276 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 TMEM25Q86YD3 366 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 TMEM86AQ8N2M4 240 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 TOP6BLQ8N6T0 577 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 C4orf32Q8N8J7 132 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 SCFD1Q8WVM8 642 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 IGSF8Q969P0 613 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 ZNF560Q96MR9 790 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 DUSP9Q99956 384 aaKnown RBP7.27□□□□□ -1.25
ATXN3-224ENST00000554040 NUP58Q9BVL2 599 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 TTLL2Q9BWV7 592 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 TNKS2Q9H2K2 1166 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 SPHK2Q9NRA0 654 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 EHD2Q9NZN4 543 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 MAGEC2Q9UBF1 373 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-224ENST00000554040 FTSJ1Q9UET6 329 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 IL17BQ9UHF5 180 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 ANKRD6Q9Y2G4 727 aa7.27□□□□□ -1.25
ATXN3-224ENST00000554040 PRRT4C9JH25 899 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 H0Y8X5 98 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 ENC1O14682 589 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 GABRDO14764 452 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 PAPSS1O43252 624 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-224ENST00000554040 RFPL3O75679 317 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 IGLV3-19P01714 112 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 SCP2P22307 547 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 BDNFP23560 247 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 ADSSP30520 456 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 CCT8P50990 548 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 TPMTP51580 245 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 TAF10Q12962 218 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 INAVAQ3KP66 663 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms