RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 TYW5A2RUC4 315 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 FAM47DPA6NHR8 397 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 TULP2O00295 520 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 XPO1O14980 1071 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 CETN3O15182 167 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 CBFA2T3O75081 653 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 SEMA4FO95754 770 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 IGLV3-19P01714 112 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 ATP5BP06576 529 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 ATXN1LP0C7T5 689 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 PABPC1P11940 636 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 LCP1P13796 627 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 POLR2EP19388 210 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 ERCC5P28715 1186 aaPredicted RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 HLA-FP30511 346 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 ACSL1P33121 698 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 CCT8P50990 548 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 UBASH3AP57075 661 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 TUBB4BP68371 445 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 CCZ1BP86790 482 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 CCZ1P86791 482 aaPredicted RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 PDE4CQ08493 712 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 DPYDQ12882 1025 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 TRIP4Q15650 581 aaPredicted RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 KIF19Q2TAC6 998 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 EDRF1Q3B7T1 1238 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 INAVAQ3KP66 663 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 ARSIQ5FYB1 569 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 RAB41Q5JT25 222 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 BSPRYQ5W0U4 402 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 TMEM215Q68D42 235 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 MBLAC2Q68D91 279 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 LAYNQ6UX15 382 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 GLRX5Q86SX6 157 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 CCDC117Q8IWD4 279 aaPredicted RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 SMYD4Q8IYR2 804 aaPredicted RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 UBA3Q8TBC4 463 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 ENOX1Q8TC92 643 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 HNRNPLLQ8WVV9 542 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 GOLGA1Q92805 767 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 TATDN2Q93075 761 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 FAXDC2Q96IV6 333 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 TSG101Q99816 390 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 XPO4Q9C0E2 1151 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 PCED1AQ9H1Q7 454 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 NCKAP1Q9Y2A7 1128 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 HBS1LQ9Y450 684 aaKnown RBP9.19□□□□□ -0.94
TDP1-208ENST00000553989 GPSM3Q9Y4H4 160 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 SNX11Q9Y5W9 270 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 ASPMQ8IZT6 3477 aa9.19□□□□□ -0.94
TDP1-208ENST00000553989 EIF4E1BA6NMX2 242 aaKnown RBP9.18□□□□□ -0.94
TDP1-208ENST00000553989 YJEFN3A6XGL0 299 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 E7ENQ6 273 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 PIK3R2O00459 728 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 TBL1XO60907 577 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 SLU7O95391 586 aaKnown RBP9.18□□□□□ -0.94
TDP1-208ENST00000553989 SERPINC1P01008 464 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 DLDP09622 509 aaKnown RBP9.18□□□□□ -0.94
TDP1-208ENST00000553989 GRK6P43250 576 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 GRIA4P48058 902 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 SLC11A2P49281 568 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 RGS7P49802 495 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 C21orf59P57076 290 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 ST8SIA6P61647 398 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 IL9RQ01113 521 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 BNC1Q01954 994 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 CAMK2GQ13555 558 aaPredicted RBP9.18□□□□□ -0.94
TDP1-208ENST00000553989 CUL2Q13617 745 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 NCAPHQ15003 741 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 COL28A1Q2UY09 1125 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 ADGRF1Q5T601 910 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 ZNF776Q68DI1 518 aaPredicted RBP9.18□□□□□ -0.94
TDP1-208ENST00000553989 PM20D1Q6GTS8 502 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 TMC6Q7Z403 805 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 PKD1L2Q7Z442 2459 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 PDZD3Q86UT5 571 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 MFN1Q8IWA4 741 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 FAM217AQ8IXS0 508 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 GALNT15Q8N3T1 639 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 RBBP8NLQ8NC74 664 aaPredicted RBP9.18□□□□□ -0.94
TDP1-208ENST00000553989 BIRC7Q96CA5 298 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 C16orf45Q96MC5 204 aaPredicted RBP9.18□□□□□ -0.94
TDP1-208ENST00000553989 TMEM245Q9H330 911 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 FBRSQ9HAH7 460 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 TM9SF3Q9HD45 589 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 ABCC13Q9NSE7 274 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 KIAA1522Q9P206 1035 aaPredicted RBP9.18□□□□□ -0.94
TDP1-208ENST00000553989 STIM2Q9P246 746 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 BTBD3Q9Y2F9 522 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 ANKRD6Q9Y2G4 727 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 RAXQ9Y2V3 346 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 CEP83Q9Y592 693 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 PCDHGB2Q9Y5G2 931 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 SLCO1B1Q9Y6L6 691 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 AKAP13Q12802 2813 aa9.18□□□□□ -0.94
TDP1-208ENST00000553989 ATRXP46100 2492 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 CKAP5Q14008 2032 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 FAM149AA5PLN7 773 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 M0QYV0 167 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms