RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 CMIPQ8IY22 773 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 GPR65Q8IYL9 337 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 TRMT2AQ8IZ69 625 aaKnown RBP6.54□□□□□ -1.36
ATXN3-223ENST00000553686 Q8N1X5 172 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 CHCHD4Q8N4Q1 142 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 URGCPQ8TCY9 931 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 MSANTD3Q96H12 275 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 ACAP3Q96P50 834 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 PLEKHG4BQ96PX9 1271 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 TMEM175Q9BSA9 504 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 TRMT61BQ9BVS5 477 aaKnown RBP6.54□□□□□ -1.36
ATXN3-223ENST00000553686 KAT14Q9H8E8 782 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 TRPV5Q9NQA5 729 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 CHST12Q9NRB3 414 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 TBC1D13Q9NVG8 400 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 GDE1Q9NZC3 331 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 ATG2AQ2TAZ0 1938 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 GREB1LQ9C091 1923 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-223ENST00000553686 NRP1O14786 923 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 ATP9AO75110 1047 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 GPR32O75388 356 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 C1QL1O75973 258 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 STC2O76061 302 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 KCNA2P16389 499 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 TMOD1P28289 359 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 NT5C2P49902 561 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 SCNN1GP51170 649 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 CREB5Q02930 508 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 HNRNPDQ14103 355 aaKnown RBP6.53□□□□□ -1.36
ATXN3-223ENST00000553686 ZNF484Q5JVG2 852 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 MIIPQ5JXC2 388 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 LIN9Q5TKA1 542 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 ZKSCAN2Q63HK3 967 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 TCEAL6Q6IPX3 200 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 Q6ZRM9 215 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 ZNF280BQ86YH2 543 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 TMPRSS6Q8IU80 811 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 TCEAL3Q969E4 200 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 ELSPBP1Q96BH3 223 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 PGBD4Q96DM1 585 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 HERC2P3Q9BVR0 1158 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 APOL6Q9BWW8 343 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 VN1R3Q9BXE9 311 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 ECHDC1Q9NTX5 307 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 FNIP2Q9P278 1114 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 EDARQ9UNE0 448 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 PRKAB1Q9Y478 270 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 HS3ST3A1Q9Y663 406 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 PIAS3Q9Y6X2 628 aa6.53□□□□□ -1.36
ATXN3-223ENST00000553686 LOC400499M0QZD8 3231 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 LNP1A1A4G5 178 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 BCLAF3A2AJT9 711 aaKnown RBP6.52□□□□□ -1.37
ATXN3-223ENST00000553686 NPIPB8E9PQR5 432 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 CDX4O14627 284 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-223ENST00000553686 FZD7O75084 574 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 OFD1O75665 1012 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 VTNP04004 478 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 C1SP09871 688 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 LTA4HP09960 611 aaKnown RBP6.52□□□□□ -1.37
ATXN3-223ENST00000553686 ENPP1P22413 925 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 CCNE1P24864 410 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 HOXA9P31269 272 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 SCAND1P57086 179 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 NLRP11P59045 1033 aaKnown RBP6.52□□□□□ -1.37
ATXN3-223ENST00000553686 NTHL1P78549 312 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 TMPRSS15P98073 1019 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 DUSP2Q05923 314 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 FAPQ12884 760 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 LMAN2Q12907 356 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 MTMR1Q13613 665 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 PLK5Q496M5 336 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 PPM1LQ5SGD2 360 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 PDXDC1Q6P996 788 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 MFSD6Q6ZSS7 791 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 LHFPL2Q6ZUX7 228 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 IQCA1Q86XH1 822 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 ITPRIPQ8IWB1 547 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 FTSJ3Q8IY81 847 aaKnown RBP6.52□□□□□ -1.37
ATXN3-223ENST00000553686 ZNF843Q8N446 348 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 METTL13Q8N6R0 699 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 SLC16A11Q8NCK7 471 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 ITFG1Q8TB96 612 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 ESR2Q92731 530 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 CUL5Q93034 780 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 GPATCH3Q96I76 525 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 MAP7D2Q96T17 732 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 PCYT2Q99447 389 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 GPR87Q9BY21 358 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 C8orf33Q9H7E9 229 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-223ENST00000553686 ZNF703Q9H7S9 590 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-223ENST00000553686 ZFP14Q9HCL3 533 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 SLC9A2Q9UBY0 812 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 DNAJB4Q9UDY4 337 aa6.52□□□□□ -1.37
ATXN3-223ENST00000553686 FRMPD4Q14CM0 1322 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 SPAARA0A1B0GVQ0 90 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 KLRF2D3W0D1 207 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 ZNF263O14978 683 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 MAGEB2O15479 319 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms