RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TREHO43280 583 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 GRK2P25098 689 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 ELF1P32519 619 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 SERPINB6P35237 376 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 ADRA1BP35368 520 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 TKTL1P51854 596 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 IFRD2Q12894 506 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-205ENST00000553474 SEMA3BQ13214 749 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 CRYMQ14894 314 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 CHI3L2Q15782 390 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 CMPK2Q5EBM0 449 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 RAB41Q5JT25 222 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 MROH9Q5TGP6 573 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 TWF2Q6IBS0 349 aaKnown RBP13.26□□□□□ -0.29
SHMT2-205ENST00000553474 CASC4Q6P4E1 433 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 PAQR9Q6ZVX9 377 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 OSTM1Q86WC4 334 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 SCML4Q8N228 414 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 MPP5Q8N3R9 675 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 PDCD7Q8N8D1 485 aaKnown RBP13.26□□□□□ -0.29
SHMT2-205ENST00000553474 MAB21L3Q8N8X9 362 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 NSMCE1Q8WV22 266 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 ARNTL2Q8WYA1 636 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 CPNE1Q99829 537 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 LPIN3Q9BQK8 851 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 PRDM12Q9H4Q4 367 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 PCMTD2Q9NV79 361 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.26□□□□□ -0.296e-6■■□□□ 12.1
SHMT2-205ENST00000553474 TXNDC16Q9P2K2 825 aa13.26□□□□□ -0.29
SHMT2-205ENST00000553474 WDR27A2RRH5 827 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 A8MUI8 341 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 M0QZ92 97 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 PTGESO14684 152 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 CAPN9O14815 690 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 GYG2O15488 501 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 HCRTO43612 131 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 ESRRAP11474 423 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 EPHB2P29323 1055 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 RPL9P32969 192 aaKnown RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 GP5P40197 560 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 DAOAP59103 153 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 STX3Q13277 289 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 GRTP1Q5TC63 336 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 PACS1Q6VY07 963 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 WDR75Q8IWA0 830 aaKnown RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 PYROXD2Q8N2H3 581 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 IRGQQ8WZA9 623 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 ISL2Q96A47 359 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 UNC93B1Q9H1C4 597 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 LRRC40Q9H9A6 602 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 HMX1Q9NP08 348 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 ALG13Q9NP73 1137 aaKnown RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 GEMIN8Q9NWZ8 242 aaKnown RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 FBXW11Q9UKB1 542 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 CDH9Q9ULB4 789 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 COL4A4P53420 1690 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 FCHO1O14526 889 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 SEPT4O43236 478 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 PEX11AO75192 247 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 LUC7L3O95232 432 aaKnown RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 AP2A1O95782 977 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 MYL4P12829 197 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 PCSK1P29120 753 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 GRIA1P42261 906 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 CDK7P50613 346 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 PPIDQ08752 370 aaKnown RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 BMPR2Q13873 1038 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 CCDC153Q494R4 210 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 MAP3K21Q5TCX8 1036 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 WSCD1Q658N2 575 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 ITPRIPL1Q6GPH6 555 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 C4orf50Q6ZRC1 276 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 BEND5Q7L4P6 421 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 RSPH3Q86UC2 560 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 TMPRSS6Q8IU80 811 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 ZNF567Q8N184 647 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 CCNYQ8ND76 341 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 HDAC11Q96DB2 347 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 MED10Q9BTT4 135 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 GOLGA2P5Q9HBQ8 144 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 DDX43Q9NXZ2 648 aaKnown RBP13.25□□□□□ -0.29
SHMT2-205ENST00000553474 ZFATQ9P243 1243 aa13.25□□□□□ -0.29
SHMT2-205ENST00000553474 ZNF638Q14966 1978 aaKnown RBP13.24□□□□□ -0.29
SHMT2-205ENST00000553474 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-205ENST00000553474 GSC2O15499 205 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 PSMD3O43242 534 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 CREB3O43889 395 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 UGT1A9O60656 530 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 MAGEC1O60732 1142 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 SERPINA6P08185 405 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 ITGA2BP08514 1039 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 TPBGLP0DKB5 382 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 RARBP10826 455 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 GNAZP19086 355 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 PSMB4P28070 264 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 CYP2C18P33260 490 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 GCKP35557 465 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms