RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 FOXD4L6Q3SYB3 417 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 FOXD4L5Q5VV16 416 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 FOXD4L3Q6VB84 417 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 GPR155Q7Z3F1 870 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 DHX40Q8IX18 779 aaKnown RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 ZNF843Q8N446 348 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 ZNF557Q8N988 423 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 FIBINQ8TAL6 211 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 FOXD4L4Q8WXT5 416 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-222ENST00000552465 FGF11Q92914 225 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 TATDN2Q93075 761 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 ABCC13Q9NSE7 274 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 FZD4Q9ULV1 537 aa17.56■□□□□ 0.4
CACNB3-222ENST00000552465 TEX51A0A1B0GUA7 166 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 CAPN9O14815 690 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 RNASEH2AO75792 299 aaKnown RBP17.55■□□□□ 0.4
CACNB3-222ENST00000552465 ASLP04424 464 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 BNIP3Q12983 259 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 ILKQ13418 452 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 ARID5BQ14865 1188 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 FAM133BQ5BKY9 247 aaKnown RBP17.55■□□□□ 0.4
CACNB3-222ENST00000552465 C9orf64Q5T6V5 341 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 MMAAQ8IVH4 418 aaKnown RBP17.55■□□□□ 0.4
CACNB3-222ENST00000552465 MFN1Q8IWA4 741 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 CACTIN-AS1Q8N1I8 211 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 KDM1BQ8NB78 822 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 MRGPRX3Q96LB0 322 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 OMDQ99983 421 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 RAB20Q9NX57 234 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 STIM2Q9P246 746 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 TSPAN16Q9UKR8 245 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 INTS6Q9UL03 887 aaKnown RBP17.55■□□□□ 0.4
CACNB3-222ENST00000552465 FLNBO75369 2602 aaKnown RBP17.55■□□□□ 0.4
CACNB3-222ENST00000552465 SHROOM3Q8TF72 1996 aa17.55■□□□□ 0.4
CACNB3-222ENST00000552465 TARSL2A2RTX5 802 aaKnown RBP17.54■□□□□ 0.4
CACNB3-222ENST00000552465 TLR4O00206 839 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 IRAK2O43187 625 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 ACSL4O60488 711 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 IGLV3-27P01718 113 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 RPL13P26373 211 aaKnown RBP17.54■□□□□ 0.4
CACNB3-222ENST00000552465 SLC8A1P32418 973 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 CSKP41240 450 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 RXRGP48443 463 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 SLC11A2P49281 568 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 NXPH1P58417 271 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 BST2Q10589 180 aaKnown RBP17.54■□□□□ 0.4
CACNB3-222ENST00000552465 ADAM9Q13443 819 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 SLC45A4Q5BKX6 768 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 MSANTD2Q6P1R3 559 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 UNC45BQ8IWX7 931 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 SIX6OS1Q8N1H7 587 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 SCML4Q8N228 414 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 FBXL13Q8NEE6 735 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 UBA3Q8TBC4 463 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 KCTD13Q8WZ19 329 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 SERAC1Q96JX3 654 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 ERVMER34-1Q9H9K5 563 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 HESX1Q9UBX0 185 aa17.54■□□□□ 0.4
CACNB3-222ENST00000552465 TTC34A8MYJ7 566 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 BRINP1O60477 761 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 MYL1P05976 194 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 GOT1P17174 413 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 CKMT2P17540 419 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 ACTN2P35609 894 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 DAOAP59103 153 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 TLE3Q04726 772 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 SGO2Q562F6 1265 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 SFMBT2Q5VUG0 894 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 NUGGCQ68CJ6 796 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 NADSYN1Q6IA69 706 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 KANSL1Q7Z3B3 1105 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 AADATQ8N5Z0 425 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 HJURPQ8NCD3 748 aaPredicted RBP17.53■□□□□ 0.4
CACNB3-222ENST00000552465 RFFLQ8WZ73 363 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 AZIN2Q96A70 460 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 FAM129BQ96TA1 746 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 CNGB3Q9NQW8 809 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 TPX2Q9ULW0 747 aaKnown RBP17.53■□□□□ 0.4
CACNB3-222ENST00000552465 ERVW-1Q9UQF0 538 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 MAPK8IP1Q9UQF2 711 aa17.53■□□□□ 0.4
CACNB3-222ENST00000552465 K7ELQ4 463 aaPredicted RBP17.52■□□□□ 0.4
CACNB3-222ENST00000552465 LCP1P13796 627 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 GLDCP23378 1020 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 MXI1P50539 228 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 PCSK4Q6UW60 755 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 SND1Q7KZF4 910 aaKnown RBP eCLIP17.52■□□□□ 0.4
CACNB3-222ENST00000552465 SPATS2Q86XZ4 545 aaKnown RBP17.52■□□□□ 0.4
CACNB3-222ENST00000552465 OXR1Q8N573 874 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 MFSD2AQ8NA29 543 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 OR14C36Q8NHC7 312 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 MYEOVQ96EZ4 313 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 PRICKLE1Q96MT3 831 aaPredicted RBP17.52■□□□□ 0.4
CACNB3-222ENST00000552465 USP25Q9UHP3 1055 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 CLCA2Q9UQC9 943 aa17.52■□□□□ 0.4
CACNB3-222ENST00000552465 EDDM13A0A1B0GTR0 161 aa17.51■□□□□ 0.39
CACNB3-222ENST00000552465 PLXNA2O75051 1894 aa17.51■□□□□ 0.39
CACNB3-222ENST00000552465 GABBR2O75899 941 aa17.51■□□□□ 0.39
CACNB3-222ENST00000552465 RHOBTB3O94955 611 aa17.51■□□□□ 0.39
CACNB3-222ENST00000552465 SRPRAP08240 638 aaKnown RBP17.51■□□□□ 0.39
CACNB3-222ENST00000552465 CD19P15391 556 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms