RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CUL5Q93034 780 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 GTF3C6Q969F1 213 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 ZNF274Q96GC6 653 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-214ENST00000550893 FUBP3Q96I24 572 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCAF11-214ENST00000550893 C7orf25Q9BPX7 421 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 LBHD1Q9BQE6 289 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-214ENST00000550893 ZSWIM1Q9BR11 485 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 SEZ6LQ9BYH1 1024 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 CYP4F11Q9HBI6 524 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 FBXO34Q9NWN3 711 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 MKS1Q9NXB0 559 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 FAM30AQ9NZY2 134 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 TUBD1Q9UJT1 453 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 PACSIN3Q9UKS6 424 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 TRHDEQ9UKU6 1024 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 RUVBL1Q9Y265 456 aaKnown RBP5.47□□□□□ -1.53
SCAF11-214ENST00000550893 ZNF318Q5VUA4 2279 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 USP34Q70CQ2 3546 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 DOCK6Q96HP0 2047 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 WDR87Q6ZQQ6 2873 aa5.46□□□□□ -1.53
SCAF11-214ENST00000550893 KMT2EQ8IZD2 1858 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 CYP3A7-CYP3A51PA0A087WV96 503 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 KIF28PB7ZC32 967 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 TEX33O43247 280 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 PCDHGA12O60330 932 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 NDUFS2O75306 463 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 PSMD10O75832 226 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 REC8O95072 547 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 PRSS23O95084 383 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 SPDEFO95238 335 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 C22orf31O95567 290 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 CA3P07451 260 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 ELANEP08246 267 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 HMGB1P09429 215 aaKnown RBP5.46□□□□□ -1.54
SCAF11-214ENST00000550893 SUPT20HL2P0C7V6 817 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 DDCP20711 480 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 CYP3A7P24462 503 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 MARK3P27448 753 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 WASP42768 502 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 ANAPC15P60006 121 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 DRP2Q13474 957 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 MTMR1Q13613 665 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 TP53BP2Q13625 1128 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 ACAP2Q15057 778 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 FBXO47Q5MNV8 452 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 HECTD2Q5U5R9 776 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 Q6YL49 198 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 HERC6Q8IVU3 1022 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 RHOT1Q8IXI2 618 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 TMEM199Q8N511 208 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 DBF4BQ8NFT6 615 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 TIFAQ96CG3 184 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 FAXDC2Q96IV6 333 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 SLC26A6Q9BXS9 759 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 UNC45AQ9H3U1 944 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 MANSC1Q9H8J5 431 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 KCNMB3Q9NPA1 279 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 SEC63Q9UGP8 760 aaKnown RBP5.46□□□□□ -1.54
SCAF11-214ENST00000550893 KCNJ14Q9UNX9 436 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 PCDHGA9Q9Y5G4 932 aaKnown RBP5.46□□□□□ -1.54
SCAF11-214ENST00000550893 PCDHGA8Q9Y5G5 932 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 PCDHGA7Q9Y5G6 932 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 PCDHGA6Q9Y5G7 932 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 PCDHGA3Q9Y5H0 932 aa5.46□□□□□ -1.54
SCAF11-214ENST00000550893 DOCK8Q8NF50 2099 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-214ENST00000550893 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-214ENST00000550893 CCDC78A2IDD5 438 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 LINC01553A4QN01 128 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 GJB5O95377 273 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 FGBP02675 491 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 MYBL2P10244 700 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 ATF7P17544 494 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-214ENST00000550893 C5AR1P21730 350 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 GCSHP23434 173 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 RFC2P35250 354 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 GATMP50440 423 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 OCA2Q04671 838 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 ITKQ08881 620 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 STK3Q13188 491 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 CAMK1Q14012 370 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 NEDD9Q14511 834 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 UTP14CQ5TAP6 766 aaKnown RBP5.45□□□□□ -1.54
SCAF11-214ENST00000550893 B3GNTL1Q67FW5 361 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-214ENST00000550893 CMTR2Q8IYT2 770 aaKnown RBP5.45□□□□□ -1.54
SCAF11-214ENST00000550893 KIAA0319LQ8IZA0 1049 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 TMEM132CQ8N3T6 1108 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 REXO4Q9GZR2 422 aaKnown RBP5.45□□□□□ -1.54
SCAF11-214ENST00000550893 SLC9A2Q9UBY0 812 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 KDM3AQ9Y4C1 1321 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 NOTCH4Q99466 2003 aa5.45□□□□□ -1.54
SCAF11-214ENST00000550893 MUC6Q6W4X9 2439 aa5.44□□□□□ -1.54
SCAF11-214ENST00000550893 FRYLO94915 3013 aa5.44□□□□□ -1.54
SCAF11-214ENST00000550893 IGKV6-21A0A0C4DH24 114 aa5.44□□□□□ -1.54
SCAF11-214ENST00000550893 A0A1B0GTW7 788 aa5.44□□□□□ -1.54
SCAF11-214ENST00000550893 TCRBV7S2A1N4TA0A589 114 aa5.44□□□□□ -1.54
SCAF11-214ENST00000550893 PIPSLA2A3N6 862 aa5.44□□□□□ -1.54
SCAF11-214ENST00000550893 C17orf102A2RUQ5 167 aa5.44□□□□□ -1.54
SCAF11-214ENST00000550893 DDX39AO00148 427 aaKnown RBP5.44□□□□□ -1.54
SCAF11-214ENST00000550893 IPO5O00410 1097 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms