RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 PIGFQ07326 219 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 CUL4AQ13619 759 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 IQCB1Q15051 598 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 MGAT5BQ3V5L5 792 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 FAXCQ5TGI0 409 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 KLHL17Q6TDP4 642 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 MAATS1Q7Z4T9 603 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 ADGRF4Q8IZF3 695 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 RNF169Q8NCN4 708 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 RUBCNQ92622 972 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 PIGSQ96S52 555 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 DPYSL5Q9BPU6 564 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 SEC61A2Q9H9S3 476 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 VAT1LQ9HCJ6 419 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 ZBTB26Q9HCK0 441 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 MRPS18AQ9NVS2 196 aaKnown RBP6.34□□□□□ -1.39
PRDM4-206ENST00000550659 ADAMTS5Q9UNA0 930 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 AGTPBP1Q9UPW5 1226 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 SHOC2Q9UQ13 582 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 TBC1D30Q9Y2I9 924 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 TMEM98Q9Y2Y6 226 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 DTNAQ9Y4J8 743 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 RIPK3Q9Y572 518 aa6.34□□□□□ -1.39
PRDM4-206ENST00000550659 LCTP09848 1927 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 MYH6P13533 1939 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 DRGXA6NNA5 263 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 PDHXO00330 501 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 DCLK1O15075 740 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 RRP9O43818 475 aaKnown RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 FLOT1O75955 427 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 ATXN1LP0C7T5 689 aaKnown RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 CETPP11597 493 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 FCER1AP12319 257 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 CKMT1AP12532 417 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 CR2P20023 1033 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 GCSHP23434 173 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 CTGFP29279 349 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 HOXA7P31268 230 aaPredicted RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 ATICP31939 592 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 NT5C2P49902 561 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 AFF3P51826 1226 aaKnown RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 SATB1Q01826 763 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 MESP2Q0VG99 397 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 FAM110CQ1W6H9 321 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 QRICH1Q2TAL8 776 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 RETSATQ6NUM9 610 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 ATG14Q6ZNE5 492 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 MED25Q71SY5 747 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 TMTC1Q8IUR5 882 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 CFAP52Q8N1V2 620 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 TMTC2Q8N394 836 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 LINC01356Q8N9X3 169 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 SIMC1Q8NDZ2 872 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 OR52N2Q8NGI0 321 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 TBC1D5Q92609 795 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 LPAR1Q92633 364 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 SLC46A1Q96NT5 459 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 RBM15Q96T37 977 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 SMOQ99835 787 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 CPPED1Q9BRF8 314 aaPredicted RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 DDX23Q9BUQ8 820 aaKnown RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 TLR10Q9BXR5 811 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 TP63Q9H3D4 680 aaPredicted RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 RIOX1Q9H6W3 641 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 RAVER2Q9HCJ3 691 aaKnown RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 WASH6PQ9NQA3 447 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 DNMT3BQ9UBC3 853 aaKnown RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 ISY1Q9ULR0 285 aaKnown RBP6.33□□□□□ -1.4
PRDM4-206ENST00000550659 HS3ST4Q9Y661 456 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 CDY1Q9Y6F8 540 aa6.33□□□□□ -1.4
PRDM4-206ENST00000550659 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 TCAF2A6NFQ2 919 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 MANSC4A6NHS7 340 aaPredicted RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 VWA5AO00534 786 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 B4GALT3O60512 393 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 CDC14BO60729 498 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 TRIM13O60858 407 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 COQ9O75208 318 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 PECAM1P16284 738 aaPredicted RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 IFNAR1P17181 557 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 MST1P26927 711 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 LRPAP1P30533 357 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 TOB1P50616 345 aaPredicted RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 RCAN1P53805 252 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 PNLIPRP1P54315 467 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 CRHR2Q13324 411 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 PKP1Q13835 747 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 BOP1Q14137 746 aaKnown RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 ANKRD1Q15327 319 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 CDC37Q16543 378 aaPredicted RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 ZNF750Q32MQ0 723 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 ASPRV1Q53RT3 343 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 NOMO2Q5JPE7 1267 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 RSRC2Q7L4I2 434 aaKnown RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 PLEKHH3Q7Z736 793 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 ANKRD23Q86SG2 305 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 TP53I13Q8NBR0 393 aaPredicted RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 CTCFLQ8NI51 663 aaPredicted RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 ASB12Q8WXK4 309 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 THAP4Q8WY91 577 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms