RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 PABPC3Q9H361 631 aaKnown RBP23.93■■□□□ 1.42
SMARCD1-209ENST00000550477 TJP2Q9UDY2 1190 aa23.93■■□□□ 1.42
SMARCD1-209ENST00000550477 TARSL2A2RTX5 802 aaKnown RBP23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 FAM47DPA6NHR8 397 aa23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 GOLGA8CPA6NN73 597 aa23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 MED7O43513 233 aa23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 PCDHGA12O60330 932 aa23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 GNA14O95837 355 aa23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 SRPRAP08240 638 aaKnown RBP23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 CSKP41240 450 aa23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 GCNT1Q02742 428 aa23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 HNRNPA1L2Q32P51 320 aaKnown RBP23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 BAHD1Q8TBE0 780 aaPredicted RBP23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 SLC12A6Q9UHW9 1150 aa23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 TPX2Q9ULW0 747 aaKnown RBP23.92■■□□□ 1.42
SMARCD1-209ENST00000550477 RNF225M0QZC1 329 aaPredicted RBP23.91■■□□□ 1.42
SMARCD1-209ENST00000550477 TAF4O00268 1085 aa23.91■■□□□ 1.42
SMARCD1-209ENST00000550477 ATXN1LP0C7T5 689 aaKnown RBP23.91■■□□□ 1.42
SMARCD1-209ENST00000550477 WFDC5Q8TCV5 224 aa23.91■■□□□ 1.42
SMARCD1-209ENST00000550477 CLEC4CQ8WTT0 213 aa23.91■■□□□ 1.42
SMARCD1-209ENST00000550477 EDDM13A0A1B0GTR0 161 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 A0A1W2PPC4 97 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 CAPNS1P04632 268 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 ARID5BQ14865 1188 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 CST6Q15828 149 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 MS4A13Q5J8X5 152 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 BEND5Q7L4P6 421 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 RRAGAQ7L523 313 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 DHX40Q8IX18 779 aaKnown RBP23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 SCUBE3Q8IX30 993 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 ELOA2Q8IYF1 753 aaPredicted RBP23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 EHBP1Q8NDI1 1231 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 DQX1Q8TE96 717 aaKnown RBP23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 ERCC4Q92889 916 aaPredicted RBP23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 FCRL2Q96LA5 508 aaPredicted RBP23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 MED15Q96RN5 788 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 PPP1R9BQ96SB3 815 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 ERVW-1Q9UQF0 538 aa23.9■■□□□ 1.42
SMARCD1-209ENST00000550477 PKD1L2Q7Z442 2459 aa23.89■■□□□ 1.42
SMARCD1-209ENST00000550477 VILLO15195 856 aa23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 SIN3BO75182 1162 aa23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 RNASEH2AO75792 299 aaKnown RBP23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 LUC7L3O95232 432 aaKnown RBP23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 MOCS2O96007 188 aaPredicted RBP23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 RPS24P62847 133 aaKnown RBP23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 SLC45A4Q5BKX6 768 aa23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 PITRM1Q5JRX3 1037 aa23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 NADSYN1Q6IA69 706 aa23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 STK32AQ8WU08 396 aa23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 FTSJ1Q9UET6 329 aa23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 FZD4Q9ULV1 537 aa23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 GOLGA4Q13439 2230 aaKnown RBP23.89■■□□□ 1.41
SMARCD1-209ENST00000550477 AKAP13Q12802 2813 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 A0A1W2PP55 124 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 H0Y8X5 98 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 GABBR2O75899 941 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 KRT5P13647 590 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 CTSKP43235 329 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 GALCP54803 685 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 ECT2LQ008S8 904 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 SLC12A1Q13621 1099 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 ISM2Q6H9L7 571 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 KLHL10Q6JEL2 608 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 FOXR2Q6PJQ5 311 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 SND1Q7KZF4 910 aaKnown RBP eCLIP23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 MMAAQ8IVH4 418 aaKnown RBP23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 ATP6V0D2Q8N8Y2 350 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 OR2T34Q8NGX1 318 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 LMLNQ96KR4 655 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 BTN2A3PQ96KV6 586 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 FAM81BQ96LP2 452 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 ZSWIM1Q9BR11 485 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 NUCKS1Q9H1E3 243 aaKnown RBP23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 AASDHPPTQ9NRN7 309 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 NAALADL1Q9UQQ1 740 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 GPSM3Q9Y4H4 160 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 PTPRBP23467 1997 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 PLXNB3Q9ULL4 1909 aa23.88■■□□□ 1.41
SMARCD1-209ENST00000550477 ACACAQ13085 2346 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 ASPMQ8IZT6 3477 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 KCNK3O14649 394 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 MID1O15344 667 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 YKT6O15498 198 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 DKK1O94907 266 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 FGFR1OPO95684 399 aaKnown RBP23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 ADH1BP00325 375 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 CDK4P11802 303 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 ABCB4P21439 1286 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 SLC8A1P32418 973 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 GPD2P43304 727 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 OXCT1P55809 520 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 SULT2A1Q06520 285 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 KCNH2Q12809 1159 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 COL9A2Q14055 689 aaPredicted RBP23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 MEA1Q16626 185 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 DCAF6Q58WW2 860 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 NCEH1Q6PIU2 408 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 LGI2Q8N0V4 545 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 CFAP52Q8N1V2 620 aa23.87■■□□□ 1.41
SMARCD1-209ENST00000550477 LMO3Q8TAP4 145 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms