RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 FSCBQ5H9T9 825 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 RABGAP1LQ5R372 815 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 DNAJC24Q6P3W2 148 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 WDR59Q6PJI9 974 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 C14orf80Q86SX3 495 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 CIR1Q86X95 450 aaPredicted RBP19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 FAM131BQ86XD5 332 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 DNAAF5Q86Y56 855 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 CCDC117Q8IWD4 279 aaPredicted RBP19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 AHI1Q8N157 1196 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 MDGA1Q8NFP4 955 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 RPRD1AQ96P16 312 aaPredicted RBP19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 RAB6CQ9H0N0 254 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 VANGL2Q9ULK5 521 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 BZW2Q9Y6E2 419 aaKnown RBP19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 STON1Q9Y6Q2 735 aa19.35■□□□□ 0.69
PRPF40B-206ENST00000547764 A0A1W2PQF6 199 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 TCRBV21S2A2A0A5A6 115 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 H0Y626 953 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 NPC1O15118 1278 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 ALDH1A2O94788 518 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 FTLP02792 175 aaPredicted RBP19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 IL12RB1P42701 662 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 ENPP2Q13822 863 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 SIM2Q14190 667 aaPredicted RBP19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 ZNF234Q14588 700 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 TDRD12Q587J7 1177 aaKnown RBP19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 PPP1R15BQ5SWA1 713 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 TTC39BQ5VTQ0 682 aaPredicted RBP19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 MBLAC2Q68D91 279 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 SPECC1LQ69YQ0 1117 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 KIAA1211LQ6NV74 962 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 CCAR2Q8N163 923 aaKnown RBP19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 GAB3Q8WWW8 586 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 CENPIQ92674 756 aaPredicted RBP19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 ERLEC1Q96DZ1 483 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 TPSD1Q9BZJ3 242 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 CD248Q9HCU0 757 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 SNX10Q9Y5X0 201 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 RAD54BQ9Y620 910 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 GPR179Q6PRD1 2367 aa19.34■□□□□ 0.69
PRPF40B-206ENST00000547764 RPP40O75818 363 aaKnown RBP19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 SERPING1P05155 500 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 PLEKP08567 350 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 GPD1P21695 349 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 IRAK1P51617 712 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 RPL7AP62424 266 aaKnown RBP19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 E2F5Q15329 346 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 FUT11Q495W5 492 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 C5orf22Q49AR2 442 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 PRR23BQ6ZRT6 265 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 STRADAQ7RTN6 431 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 VSTM4Q8IW00 320 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 CYB5D2Q8WUJ1 264 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 HMGB4Q8WW32 186 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 C1orf74Q96LT6 269 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 MCEEQ96PE7 176 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 HAPLN3Q96S86 360 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 KIAA1522Q9P206 1035 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 ADAMTS1Q9UHI8 967 aa19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 INTS6Q9UL03 887 aaKnown RBP19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 SMG5Q9UPR3 1016 aaKnown RBP19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 RIF1Q5UIP0 2472 aaKnown RBP19.33■□□□□ 0.68
PRPF40B-206ENST00000547764 A0A1B0GVM2 712 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 TCAF2A6NFQ2 919 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 ATMINO43313 823 aaPredicted RBP19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 RTN2O75298 545 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 POLR2EP19388 210 aaKnown RBP19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 HDAC4P56524 1084 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 MAMLD1Q13495 774 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 LPAL2Q16609 132 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 PTPRNQ16849 979 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 PLEKHA7Q6IQ23 1121 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 DCUN1D2Q6PH85 259 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 CEP68Q76N32 757 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 ZNF683Q8IZ20 524 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 FAM172AQ8WUF8 416 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 TTC17Q96AE7 1141 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 PARVAQ9NVD7 372 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 BCCIPQ9P287 314 aaKnown RBP eCLIP19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 PLA2G4CQ9UP65 541 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 EML5Q05BV3 1969 aa19.32■□□□□ 0.68
PRPF40B-206ENST00000547764 ANKRD62A6NC57 917 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 AP5Z1O43299 807 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 ATP5BP06576 529 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 DLDP09622 509 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 GABRG2P18507 467 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 ADRA1BP35368 520 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 CSKP41240 450 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 ZNF143P52747 638 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 TRIM14Q14142 442 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 PITRM1Q5JRX3 1037 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 ACBD5Q5T8D3 534 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 SERPINA13PQ6UXR4 307 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 VPS36Q86VN1 386 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 PGBD3Q8N328 593 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 ISCUQ9H1K1 167 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 RAB23Q9ULC3 237 aa19.31■□□□□ 0.68
PRPF40B-206ENST00000547764 INVSQ9Y283 1065 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms