RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SLC9A4Q6AI14 798 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 NEK8Q86SG6 692 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 CREBRFQ8IUR6 639 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 NGEFQ8N5V2 710 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 DENND1AQ8TEH3 1009 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 ATP2A3Q93084 1043 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 PBKQ96KB5 322 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 ZNF48Q96MX3 618 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-210ENST00000547654 ZCWPW1Q9H0M4 648 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 ABHD16BQ9H3Z7 469 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 SYNCQ9H7C4 482 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 ADD3Q9UEY8 706 aaKnown RBP4.67□□□□□ -1.66
SCAF11-210ENST00000547654 SERGEFQ9UGK8 458 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 CAPN11Q9UMQ6 739 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 HPSEQ9Y251 543 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 CYP46A1Q9Y6A2 500 aa4.67□□□□□ -1.66
SCAF11-210ENST00000547654 BICDL2A1A5D9 508 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 J3KTA2 159 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 RGS10O43665 173 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 RRP9O43818 475 aaKnown RBP4.66□□□□□ -1.66
SCAF11-210ENST00000547654 TSPAN9O75954 239 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 SGPL1O95470 568 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 LATS1O95835 1130 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 TFRCP02786 760 aaKnown RBP4.66□□□□□ -1.66
SCAF11-210ENST00000547654 DRD4P21917 467 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 CERS1P27544 350 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 GCLCP48506 637 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-210ENST00000547654 CCT8P50990 548 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 RPP30P78346 268 aaKnown RBP4.66□□□□□ -1.66
SCAF11-210ENST00000547654 FHL1Q13642 323 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 CDC37Q16543 378 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-210ENST00000547654 MGAT5BQ3V5L5 792 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 RBM20Q5T481 1227 aaKnown RBP4.66□□□□□ -1.66
SCAF11-210ENST00000547654 FCRL6Q6DN72 434 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 LRRC8DQ7L1W4 858 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 SYT13Q7L8C5 426 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 DTX2Q86UW9 622 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.66□□□□□ -1.66
SCAF11-210ENST00000547654 CCDC191Q8NCU4 936 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 CUL5Q93034 780 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 REPS1Q96D71 796 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 RADILQ96JH8 1075 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 ARHGAP39Q9C0H5 1083 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 XPNPEP3Q9NQH7 507 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 DIAPH3Q9NSV4 1193 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 NFU1Q9UMS0 254 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 SHOC2Q9UQ13 582 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 TMEM5Q9Y2B1 443 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 DNAJC16Q9Y2G8 782 aa4.66□□□□□ -1.66
SCAF11-210ENST00000547654 PNMA6EA0A0J9YXQ4 647 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 VWA3AA6NCI4 1184 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 STX16-NPEPL1H3BU86 382 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 STX16O14662 325 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 ZSCAN9O15535 394 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-210ENST00000547654 HNRNPCP07910 306 aaKnown RBP eCLIP4.65□□□□□ -1.67
SCAF11-210ENST00000547654 PDHA1P08559 390 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 CBSLP0DN79 551 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 CPA1P15085 419 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 CHRM3P20309 590 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 HOXD13P35453 343 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 CBSP35520 551 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 SNX16P57768 344 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 CHAF1BQ13112 559 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 MAMLD1Q13495 774 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 ATP1A4Q13733 1029 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 BAK1Q16611 211 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 SNX30Q5VWJ9 437 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 KLHL24Q6TFL4 600 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 LAYNQ6UX15 382 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 ATF7IPQ6VMQ6 1270 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 FAM43BQ6ZT52 329 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-210ENST00000547654 KRT74Q7RTS7 529 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 MAVSQ7Z434 540 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 YTHDF3Q7Z739 585 aaKnown RBP4.65□□□□□ -1.67
SCAF11-210ENST00000547654 GAS2L3Q86XJ1 694 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 DIS3L2Q8IYB7 885 aaKnown RBP4.65□□□□□ -1.67
SCAF11-210ENST00000547654 HMGB4Q8WW32 186 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 WASF1Q92558 559 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 NSUN4Q96CB9 384 aaKnown RBP4.65□□□□□ -1.67
SCAF11-210ENST00000547654 ASB2Q96Q27 587 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 MESP1Q9BRJ9 268 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 TTYH3Q9C0H2 523 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 VPS16Q9H269 839 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 PLSCR4Q9NRQ2 329 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 MRGBPQ9NV56 204 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 DKK4Q9UBT3 224 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 KCND3Q9UK17 655 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 HSF4Q9ULV5 492 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 BTBD3Q9Y2F9 522 aa4.65□□□□□ -1.67
SCAF11-210ENST00000547654 RSF1Q96T23 1441 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-210ENST00000547654 hCG_1807616A0A1W2PRN6 198 aa4.64□□□□□ -1.67
SCAF11-210ENST00000547654 TSPAN4O14817 238 aa4.64□□□□□ -1.67
SCAF11-210ENST00000547654 KLK10O43240 276 aa4.64□□□□□ -1.67
SCAF11-210ENST00000547654 SRGAP2O75044 1071 aa4.64□□□□□ -1.67
SCAF11-210ENST00000547654 GUCY1B2O75343 617 aa4.64□□□□□ -1.67
SCAF11-210ENST00000547654 VPS4BO75351 444 aa4.64□□□□□ -1.67
SCAF11-210ENST00000547654 PTP4A3O75365 173 aa4.64□□□□□ -1.67
SCAF11-210ENST00000547654 CSF1RP07333 972 aa4.64□□□□□ -1.67
SCAF11-210ENST00000547654 NR2F6P10588 404 aa4.64□□□□□ -1.67
SCAF11-210ENST00000547654 GLULP15104 373 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms