RNA–Protein interactions for RNA: ENST00000546962.5

TMEM116-204, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-204ENST00000546962 SLFN5Q08AF3 891 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 SEMA3BQ13214 749 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 ADAM9Q13443 819 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 PABPC1LQ4VXU2 614 aaKnown RBP3.28□□□□□ -1.88
TMEM116-204ENST00000546962 ZNF484Q5JVG2 852 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 TANGO2Q6ICL3 276 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 PPP4R3AQ6IN85 833 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 APOA5Q6Q788 366 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 Q6ZVL8 140 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 CXXC5Q7LFL8 322 aaKnown RBP3.28□□□□□ -1.88
TMEM116-204ENST00000546962 PIP4P1Q86T03 277 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 RALGPS2Q86X27 583 aaPredicted RBP3.28□□□□□ -1.88
TMEM116-204ENST00000546962 GLB1L2Q8IW92 636 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 RHOT1Q8IXI2 618 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 DRC7Q8IY82 874 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 METTL13Q8N6R0 699 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 KBTBD3Q8NAB2 608 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 ITFG1Q8TB96 612 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 DEPDC1BQ8WUY9 529 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 TRAPPC12Q8WVT3 735 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 ADAMTS14Q8WXS8 1223 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 LRTOMTQ8WZ04 291 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 HOXB13Q92826 284 aaPredicted RBP3.28□□□□□ -1.88
TMEM116-204ENST00000546962 CUL5Q93034 780 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 RGMAQ96B86 450 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 ZBTB10Q96DT7 871 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 MCRS1Q96EZ8 462 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 WBP1Q96G27 269 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 DYDC2Q96IM9 177 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 CDK5RAP3Q96JB5 506 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 SGCZQ96LD1 299 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 SCLT1Q96NL6 688 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 TMEM209Q96SK2 561 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 MAP7D2Q96T17 732 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 C7orf25Q9BPX7 421 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 HERC2P3Q9BVR0 1158 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 VN1R3Q9BXE9 311 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 C22orf23Q9BZE7 217 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 JMJD4Q9H9V9 463 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 KCND1Q9NSA2 647 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.28□□□□□ -1.88
TMEM116-204ENST00000546962 DNAI1Q9UI46 699 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 ANAPC4Q9UJX5 808 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 SIK3Q9Y2K2 1263 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 ATG2AQ2TAZ0 1938 aa3.28□□□□□ -1.88
TMEM116-204ENST00000546962 COL1A2P08123 1366 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 USP9XQ93008 2570 aaPredicted RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 ADAMTS20P59510 1910 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 GREB1LQ9C091 1923 aaPredicted RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 PLXNA4Q9HCM2 1894 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 SPEGQ15772 3267 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 CCDC189A1A4V9 331 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 FAM171A2A8MVW0 826 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 E9PAM4 449 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 HRKO00198 91 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 ZNF197O14709 1029 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 NRP1O14786 923 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 SLC16A6O15403 523 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 MAGEB2O15479 319 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 RRP8O43159 456 aaKnown RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 EXTL3O43909 919 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 ZNF623O75123 536 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 HMMRO75330 724 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 GPR32O75388 356 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 FGAP02671 866 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 C8AP07357 584 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 GAAP10253 952 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 PCP11498 1178 aaKnown RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 KCNA2P16389 499 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 PTPN2P17706 415 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 GDI1P31150 447 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 ADCY8P40145 1251 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 HALP42357 657 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 IL12RB1P42701 662 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 PXNP49023 591 aaPredicted RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 PRIM2P49643 509 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 ITGA1P56199 1179 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 NLRP11P59045 1033 aaKnown RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 RAB1AP62820 205 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 NTHL1P78549 312 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 SRSF3P84103 164 aaKnown RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 GFPT1Q06210 699 aaPredicted RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 TARDBPQ13148 414 aaKnown RBP eCLIP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 STK3Q13188 491 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 SLC14A1Q13336 389 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 KRT72Q14CN4 511 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 POLD3Q15054 466 aaPredicted RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 PTPAQ15257 358 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 TRIP6Q15654 476 aaKnown RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 MAPK6Q16659 721 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 USP41Q3LFD5 358 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 WDR72Q3MJ13 1102 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 KHDC1Q4VXA5 237 aaKnown RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 CCDC184Q52MB2 194 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 USP39Q53GS9 565 aaKnown RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 TAF1BQ53T94 588 aaPredicted RBP3.27□□□□□ -1.89
TMEM116-204ENST00000546962 CCDC157Q569K6 752 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 THEMIS2Q5TEJ8 643 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 FAM160B1Q5W0V3 765 aa3.27□□□□□ -1.89
TMEM116-204ENST00000546962 TMEM200BQ69YZ2 307 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms