RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 SLC8A2Q9UPR5 921 aa8.05□□□□□ -1.12
SNHG1-223ENST00000545440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.05□□□□□ -1.122e-26■□□□□ 8.9
SNHG1-223ENST00000545440 DMXL1Q9Y485 3027 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 FAM181BA6NEQ2 426 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 GREM1O60565 184 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 BPNT1O95861 308 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 APODP05090 189 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 IRF1P10914 325 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 RARGP13631 454 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 CD19P15391 556 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 EIF4A3P38919 411 aaKnown RBP8.04□□□□□ -1.12
SNHG1-223ENST00000545440 TKTL1P51854 596 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 ZNF132P52740 706 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 MRPS21P82921 87 aaKnown RBP8.04□□□□□ -1.12
SNHG1-223ENST00000545440 GAD2Q05329 585 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 DMWDQ09019 674 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 ADIGQ0VDE8 80 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 POU4F3Q15319 338 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 STILQ15468 1287 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 CAMK4Q16566 473 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 HSF5Q4G112 596 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-223ENST00000545440 PREPLQ4J6C6 727 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-223ENST00000545440 C10orf120Q5SQS8 335 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 LY6G5CQ5SRR4 150 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 BTBD8Q5XKL5 378 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 ZNF385CQ66K41 422 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-223ENST00000545440 PM20D1Q6GTS8 502 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 LAIR1Q6GTX8 287 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 TMEM270Q6UE05 265 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 LCLAT1Q6UWP7 414 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 C8orf86Q6ZUL3 223 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 SCD5Q86SK9 330 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 C12orf40Q86WS4 652 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 SCML4Q8N228 414 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 MLKLQ8NB16 471 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 USP33Q8TEY7 942 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 KCTD13Q8WZ19 329 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 CNOT6LQ96LI5 555 aaKnown RBP8.04□□□□□ -1.12
SNHG1-223ENST00000545440 PNKPQ96T60 521 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 SRRTQ9BXP5 876 aaKnown RBP8.04□□□□□ -1.12
SNHG1-223ENST00000545440 SPHK2Q9NRA0 654 aa8.04□□□□□ -1.12
SNHG1-223ENST00000545440 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.04□□□□□ -1.12
SNHG1-223ENST00000545440 ADAMTS9Q9P2N4 1935 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 CACNA1AO00555 2505 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 FRYLO94915 3013 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 A0A0A0MRY4 1105 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 GTPBP10A4D1E9 387 aaKnown RBP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 K7EQS6 105 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 MDM4O15151 490 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 CACNG3O60359 315 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 LRP3O75074 770 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 TULP3O75386 442 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 STC2O76061 302 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 KAT7O95251 611 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 APBB3O95704 486 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 TBX18O95935 607 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 ZBED1O96006 694 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 CD68P34810 354 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 GRIA2P42262 883 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 DGKGP49619 791 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 YWHAGP61981 247 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 COG7P83436 770 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 LMNB2Q03252 620 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 KDSRQ06136 332 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 SIM2Q14190 667 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 DMC1Q14565 340 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 MEA1Q16626 185 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 HEATR6Q6AI08 1181 aaKnown RBP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 TRIM65Q6PJ69 517 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 PRR23BQ6ZRT6 265 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 RSRC2Q7L4I2 434 aaKnown RBP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 ENOSF1Q7L5Y1 443 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 BHLHA9Q7RTU4 235 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 ARHGEF19Q8IW93 802 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 SIX6OS1Q8N1H7 587 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 TERB1Q8NA31 727 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 RBBP8NLQ8NC74 664 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 GAB3Q8WWW8 586 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 TFAP2BQ92481 460 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 KAT5Q92993 513 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 WBP2Q969T9 261 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 FAM81BQ96LP2 452 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 KREMEN1Q96MU8 473 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 IPO9Q96P70 1041 aaKnown RBP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 ULBP1Q9BZM6 244 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 INTS2Q9H0H0 1204 aaKnown RBP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 NUP62CLQ9H1M0 184 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 LRRC4Q9HBW1 653 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 CNGB3Q9NQW8 809 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 ARHGEF4Q9NR80 690 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 OLA1Q9NTK5 396 aaKnown RBP8.03□□□□□ -1.12
SNHG1-223ENST00000545440 EBF1Q9UH73 591 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 STRIP2Q9ULQ0 834 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 MMP17Q9ULZ9 603 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 CNTN6Q9UQ52 1028 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 ZNF510Q9Y2H8 683 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 PCDHB4Q9Y5E5 795 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 PCDHGB7Q9Y5F8 929 aa8.03□□□□□ -1.12
SNHG1-223ENST00000545440 CACNA1EQ15878 2313 aa8.02□□□□□ -1.13
SNHG1-223ENST00000545440 GON4LQ3T8J9 2241 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms