RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 BRD9Q9H8M2 597 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 ECT2Q9H8V3 914 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDX11-227ENST00000544652 GPATCH2LQ9NWQ4 482 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 DDX56Q9NY93 547 aaKnown RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 RCOR3Q9P2K3 495 aaPredicted RBP13.51□□□□□ -0.25
DDX11-227ENST00000544652 VANGL2Q9ULK5 521 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 DUSP12Q9UNI6 340 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 SORCS3Q9UPU3 1222 aa13.51□□□□□ -0.25
DDX11-227ENST00000544652 C3orf70A6NLC5 250 aaPredicted RBP13.5□□□□□ -0.25
DDX11-227ENST00000544652 ZNF487B1APH4 448 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 DDX3YO15523 660 aaKnown RBP13.5□□□□□ -0.25
DDX11-227ENST00000544652 HOXC11O43248 304 aaPredicted RBP13.5□□□□□ -0.25
DDX11-227ENST00000544652 KIF5CO60282 957 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 FTCDO95954 541 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 KDELR1P24390 212 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 IL4RP24394 825 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 GGCXP38435 758 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 MARCKSL1P49006 195 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 VCPP55072 806 aaKnown RBP13.5□□□□□ -0.25
DDX11-227ENST00000544652 GAD2Q05329 585 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 TNK2Q07912 1038 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 LY6G5CQ5SRR4 150 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 LRRC31Q6UY01 552 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 RNF135Q8IUD6 432 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 C17orf53Q8N3J3 647 aaPredicted RBP13.5□□□□□ -0.25
DDX11-227ENST00000544652 CPA6Q8N4T0 437 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 HJURPQ8NCD3 748 aaPredicted RBP13.5□□□□□ -0.25
DDX11-227ENST00000544652 HSPH1Q92598 858 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 FAF2Q96CS3 445 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 TMA16Q96EY4 203 aaKnown RBP13.5□□□□□ -0.25
DDX11-227ENST00000544652 EPAS1Q99814 870 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 PCDH18Q9HCL0 1135 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 GTSE1Q9NYZ3 720 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 ZNF212Q9UDV6 495 aa13.5□□□□□ -0.25
DDX11-227ENST00000544652 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.5□□□□□ -0.25
DDX11-227ENST00000544652 ANKRD36A6QL64 1941 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 WASH4PA8MWX3 477 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 TRDMT1O14717 391 aaKnown RBP13.49□□□□□ -0.25
DDX11-227ENST00000544652 NARSO43776 548 aaKnown RBP13.49□□□□□ -0.25
DDX11-227ENST00000544652 CACNG3O60359 315 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 TSPAN3O60637 253 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 ADH1CP00326 375 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 CYBBP04839 570 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 ADH5P11766 374 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 MSNP26038 577 aaKnown RBP13.49□□□□□ -0.25
DDX11-227ENST00000544652 HOXD9P28356 352 aaPredicted RBP13.49□□□□□ -0.25
DDX11-227ENST00000544652 GJC1P36383 396 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 IRAK1P51617 712 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 CDH6P55285 790 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 RPS24P62847 133 aaKnown RBP13.49□□□□□ -0.25
DDX11-227ENST00000544652 DPYSL3Q14195 570 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 TAZQ16635 292 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 ITPRIPL2Q3MIP1 535 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 ZNF569Q5MCW4 686 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 RABGAP1LQ5R372 815 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 TPGS1Q6ZTW0 290 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 CHST9Q7L1S5 443 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 NLRP14Q86W24 1093 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 ETFBKMTQ8IXQ9 262 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 GJD3Q8N144 294 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 SLC35F6Q8N357 371 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 EXD1Q8NHP7 514 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 RAPGEF5Q92565 580 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 ALG3Q92685 438 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 TBC1D31Q96DN5 1066 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 CHFRQ96EP1 664 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 RPRD1AQ96P16 312 aaPredicted RBP13.49□□□□□ -0.25
DDX11-227ENST00000544652 ZNF670Q9BS34 389 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 BBS2Q9BXC9 721 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 TLR10Q9BXR5 811 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 ZYG11BQ9C0D3 744 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 CD320Q9NPF0 282 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 CWC15Q9P013 229 aaKnown RBP13.49□□□□□ -0.25
DDX11-227ENST00000544652 FBXO10Q9UK96 956 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 PACSIN2Q9UNF0 486 aaPredicted RBP13.49□□□□□ -0.25
DDX11-227ENST00000544652 JRKLQ9Y4A0 524 aa13.49□□□□□ -0.25
DDX11-227ENST00000544652 MYO18AQ92614 2054 aaKnown RBP13.48□□□□□ -0.25
DDX11-227ENST00000544652 A0A1B0GVM2 712 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 TYW5A2RUC4 315 aaKnown RBP13.48□□□□□ -0.25
DDX11-227ENST00000544652 TCAF2A6NFQ2 919 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 H3BRJ5 948 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 EEF2KO00418 725 aaKnown RBP13.48□□□□□ -0.25
DDX11-227ENST00000544652 FGF10O15520 208 aaPredicted RBP13.48□□□□□ -0.25
DDX11-227ENST00000544652 CREB3O43889 395 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 TBL1XO60907 577 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 SRGAP2O75044 1071 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 CNTN5O94779 1100 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 LUC7L3O95232 432 aaKnown RBP13.48□□□□□ -0.25
DDX11-227ENST00000544652 CD48P09326 243 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 TYRP14679 529 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 RHOQP17081 205 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 GOT1P17174 413 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 GJA4P35212 333 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 DEKP35659 375 aaKnown RBP13.48□□□□□ -0.25
DDX11-227ENST00000544652 EIF2DP41214 584 aaKnown RBP13.48□□□□□ -0.25
DDX11-227ENST00000544652 CDH4P55283 916 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 RWDD2BP57060 319 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 TPI1P60174 286 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 PFKPQ01813 784 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms