RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 POM121BA6NF01 834 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 DDX3XO00571 662 aaKnown RBP eCLIP6.66□□□□□ -1.341e-6■■■■□ 20.9
CPSF7-222ENST00000544585 SH2B2O14492 632 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 TEX28O15482 410 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 FOXD2O60548 495 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 PHF2O75151 1096 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 CSDE1O75534 798 aaKnown RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 DDHD2O94830 711 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 URODP06132 367 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 CENPBP07199 599 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 GLULP15104 373 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 FGFR4P22455 802 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 SLC7A1P30825 629 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 SFNP31947 248 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 CIITAP33076 1130 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 GPC5P78333 572 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 NKX6-1P78426 367 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 IL13RA1P78552 427 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 MEF2AQ02078 507 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 MAN2A1Q16706 1144 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 CR1LQ2VPA4 569 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 MTSS1LQ765P7 747 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 CATSPER4Q7RTX7 472 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 SGMS1Q86VZ5 419 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 ZNF280BQ86YH2 543 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 WFDC3Q8IUB2 231 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 SH2D3CQ8N5H7 860 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 NELL1Q92832 810 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 LPPQ93052 612 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 ARL8AQ96BM9 186 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 PGBD1Q96JS3 809 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 ZNF668Q96K58 619 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 RIT2Q99578 217 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 JPH2Q9BR39 696 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 DDX23Q9BUQ8 820 aaKnown RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 COLEC11Q9BWP8 271 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 VN1R3Q9BXE9 311 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 UNKQ9C0B0 810 aaKnown RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 POLR3BQ9NW08 1133 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 BARHL2Q9NY43 387 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 DNAJB4Q9UDY4 337 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 CCDC39Q9UFE4 941 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 GMEB2Q9UKD1 530 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 MAGED2Q9UNF1 606 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 MRPS17Q9Y2R5 130 aaKnown RBP6.66□□□□□ -1.34
CPSF7-222ENST00000544585 PCDHB2Q9Y5E7 798 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 MAST4O15021 2626 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 CNTNAP2Q9UHC6 1331 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 CEP250Q9BV73 2442 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 NCOR2Q9Y618 2525 aa6.66□□□□□ -1.34
CPSF7-222ENST00000544585 ACACBO00763 2458 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 A0A087WV62 115 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 ISM1B1AKI9 464 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 SLC26A4O43511 780 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 DYRK3O43781 588 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 TLR5O60602 858 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 LRP3O75074 770 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 MAFO75444 373 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 RFPL2O75678 378 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 KITP10721 976 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 TYRP14679 529 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 BRAFP15056 766 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 RXRAP19793 462 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CTSSP25774 331 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CHMLP26374 656 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 GNA11P29992 359 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 ECHS1P30084 290 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 ADSLP30566 484 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 RPS9P46781 194 aaKnown RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 GLRBP48167 497 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 GLUD2P49448 558 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 JAK3P52333 1124 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 PER3P56645 1201 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CD83Q01151 205 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CREMQ03060 361 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 NCBP1Q09161 790 aaKnown RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 HTR4Q13639 388 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 STILQ15468 1287 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 TARBP2Q15633 366 aaKnown RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 MLF2Q15773 248 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CNGA2Q16280 664 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 USP41Q3LFD5 358 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 PLEKHN1Q494U1 663 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 KHDC1Q4VXA5 237 aaKnown RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 XKR3Q5GH77 459 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 JAKMIP3Q5VZ66 844 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 KANK2Q63ZY3 851 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 PGBD2Q6P3X8 592 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 SYDE1Q6ZW31 735 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CXXC5Q7LFL8 322 aaKnown RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 GPR155Q7Z3F1 870 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 LIX1LQ8IVB5 337 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 MYCT1Q8N699 235 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CELF5Q8N6W0 485 aaKnown RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 RDM1Q8NG50 284 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 ABHD4Q8TB40 342 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 FEZF2Q8TBJ5 459 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CCDC12Q8WUD4 166 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CRYGNQ8WXF5 182 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CLDN23Q96B33 292 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms