RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ZNF852Q6ZMS4 543 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ZNF662Q6ZS27 426 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 FAM72BQ86X60 149 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 RHOT1Q8IXI2 618 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SYCE1Q8N0S2 351 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TEKT4Q8WW24 435 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TBC1D31Q96DN5 1066 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CHFRQ96EP1 664 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 P2RY11Q96G91 374 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 COL25A1Q9BXS0 654 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ZYG11BQ9C0D3 744 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MFSD1Q9H3U5 465 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MPP6Q9NZW5 540 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 DEC1Q9P2X7 70 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KIAA1549LQ6ZVL6 1849 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 VCANP13611 3396 aa14.93□□□□□ -0.02
TNFRSF1A-216ENST00000543995 GRID2IPA4D2P6 1211 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 EEF2KO00418 725 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PALMO75781 387 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 LUC7L3O95232 432 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 EPHB2P29323 1055 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 OPRD1P41143 372 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 EIF2DP41214 584 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 DGKGP49619 791 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 GALK1P51570 392 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 IRAK1P51617 712 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KDSRQ06136 332 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PREPLQ4J6C6 727 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ATP13A4Q4VNC1 1196 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ALFQ53S48 1182 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 NAIF1Q69YI7 327 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 GRAMD4Q6IC98 578 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TXNDC11Q6PKC3 985 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TRIM67Q6ZTA4 783 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ETFBKMTQ8IXQ9 262 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ZNF683Q8IZ20 524 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CCAR2Q8N163 923 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KCTD6Q8NC69 237 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KCTD15Q96SI1 283 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PNKPQ96T60 521 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KLHL11Q9NVR0 708 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TRMT1Q9NXH9 659 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PPARGC1AQ9UBK2 798 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 NDRG2Q9UN36 371 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MRPS17Q9Y2R5 130 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CAPN6Q9Y6Q1 641 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 IGLV3-10A0A075B6K4 115 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 DRGXA6NNA5 263 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PI4K2BG5E9Z4 385 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 DAPK3O43293 454 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CLDN11O75508 207 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CNTN5O94779 1100 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ARL4AP40617 200 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CDH4P55283 916 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CDH6P55285 790 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 STARD6P59095 220 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 GRSF1Q12849 480 aaKnown RBP eCLIP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ZNF177Q13360 481 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 UBXN2BQ14CS0 331 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 DPYSL2Q16555 572 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 C5orf22Q49AR2 442 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MANEALQ5VSG8 457 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CHST9Q7L1S5 443 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PEX26Q7Z412 305 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 POLNQ7Z5Q5 900 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TFAP2DQ7Z6R9 452 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ZNF557Q8N988 423 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SLC2A11Q9BYW1 496 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CATSPERBQ9H7T0 1116 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ARHGEF4Q9NR80 690 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 CLEC4EQ9ULY5 219 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PYCARDQ9ULZ3 195 aa14.92□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KANSL1LA0AUZ9 987 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 H3BRJ5 948 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TRIM24O15164 1050 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PSTPIP1O43586 416 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 APODP05090 189 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 GOT1P17174 413 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ZNF135P52742 658 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SEMA3BQ13214 749 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 LRRC38Q5VT99 294 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 NUDT18Q6ZVK8 323 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 MAP7D3Q8IWC1 876 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 LRRC57Q8N9N7 239 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 ALS2CR12Q96Q35 445 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TBC1D17Q9HA65 648 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 DDX56Q9NY93 547 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 AMFRQ9UKV5 643 aa14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.91□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TBC1D3BA6NDS4 549 aa14.9□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KAT7O95251 611 aa14.9□□□□□ -0.02
TNFRSF1A-216ENST00000543995 KRT1P04264 644 aa14.9□□□□□ -0.02
TNFRSF1A-216ENST00000543995 RHOQP17081 205 aa14.9□□□□□ -0.02
TNFRSF1A-216ENST00000543995 DRD1P21728 446 aa14.9□□□□□ -0.02
TNFRSF1A-216ENST00000543995 OR1E1P30953 314 aa14.9□□□□□ -0.02
TNFRSF1A-216ENST00000543995 HTR7P34969 479 aa14.9□□□□□ -0.02
TNFRSF1A-216ENST00000543995 PDK2Q15119 407 aa14.9□□□□□ -0.02
TNFRSF1A-216ENST00000543995 TMEM196Q5HYL7 178 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms