RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 DEFB106AQ8N104 65 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 CFAP52Q8N1V2 620 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 MINDY1Q8N5J2 469 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 KDM1BQ8NB78 822 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 TMEM35BQ8NCS4 154 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 ADAM32Q8TC27 787 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 SHC3Q92529 594 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 SNX19Q92543 992 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 TTC17Q96AE7 1141 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 SLC39A13Q96H72 371 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 FCRL2Q96LA5 508 aaPredicted RBP7.41□□□□□ -1.22
NUP43-206ENST00000543637 GBP4Q96PP9 640 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 OMDQ99983 421 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 TMEM245Q9H330 911 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 WDCPQ9H6R7 721 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 SGK2Q9HBY8 427 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 PRSS16Q9NQE7 514 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 ASNSD1Q9NWL6 643 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 DDIT4Q9NX09 232 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 RRN3Q9NYV6 651 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 SLC25A13Q9UJS0 675 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 STAP1Q9ULZ2 295 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 ERVW-1Q9UQF0 538 aa7.41□□□□□ -1.22
NUP43-206ENST00000543637 SDK1Q7Z5N4 2213 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 EDDM13A0A1B0GTR0 161 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 BECN2A8MW95 431 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 UPK3BL1B0FP48 263 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 UPK3BL2E5RIL1 263 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 M0QYT0 321 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 GRAP2O75791 330 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 FSBPO95073 299 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 TRIM16O95361 564 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 CER1O95813 267 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 ZNF18P17022 549 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 CDK11BP21127 795 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 EEF1GP26641 437 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 CLCN1P35523 988 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 CSKP41240 450 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 MATKP42679 507 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 SGSHP51688 502 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 RNASE9P60153 205 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 RPS14P62263 151 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 RPS24P62847 133 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 KRT83P78385 493 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 FOXC1Q12948 553 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 NME3Q13232 169 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 ZNF177Q13360 481 aaPredicted RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 DRAP1Q14919 205 aaPredicted RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 HSP90AA4PQ58FG1 418 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 FAM133BQ5BKY9 247 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 PITRM1Q5JRX3 1037 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 FKBP15Q5T1M5 1219 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 ACBD5Q5T8D3 534 aaPredicted RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 NADSYN1Q6IA69 706 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 LRRC31Q6UY01 552 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 TAC4Q86UU9 113 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 CACUL1Q86Y37 369 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 IRF2BP1Q8IU81 584 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 PASD1Q8IV76 773 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 CCAR2Q8N163 923 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 ZNF366Q8N895 744 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 C1orf131Q8NDD1 294 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 DEFB124Q8NES8 71 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 DNASE2BQ8WZ79 361 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 C18orf8Q96DM3 657 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 PCMTD1Q96MG8 357 aaPredicted RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 RPRD1AQ96P16 312 aaPredicted RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 SIK2Q9H0K1 926 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 NUCKS1Q9H1E3 243 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 VPS16Q9H269 839 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 CAPN10Q9HC96 672 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 CD248Q9HCU0 757 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 ACP6Q9NPH0 428 aa7.4□□□□□ -1.22
NUP43-206ENST00000543637 DNAAF2Q9NVR5 837 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.4□□□□□ -1.22
NUP43-206ENST00000543637 EIF2B4Q9UI10 523 aaKnown RBP7.4□□□□□ -1.22
NUP43-206ENST00000543637 TMEM131Q92545 1883 aa7.4□□□□□ -1.23
NUP43-206ENST00000543637 NYNRINQ9P2P1 1898 aaKnown RBP7.4□□□□□ -1.23
NUP43-206ENST00000543637 OTOGLQ3ZCN5 2332 aa7.4□□□□□ -1.23
NUP43-206ENST00000543637 RIF1Q5UIP0 2472 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 TP53BP1Q12888 1972 aaPredicted RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 A0A1B0GVM2 712 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 TCAF2A6NFQ2 919 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 FAM47DPA6NHR8 397 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 LRRC72A6NJI9 287 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 GIPC1O14908 333 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SEMA4FO95754 770 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 IGLV3-19P01714 112 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 PMLP29590 882 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SLC8A1P32418 973 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 ACSL1P33121 698 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SULT1E1P49888 294 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 AFF3P51826 1226 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 SIM1P81133 766 aaPredicted RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 SHC2P98077 582 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 APBA1Q02410 837 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 DEUP1Q05D60 604 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 CCDC15Q0P6D6 951 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SEMA3BQ13214 749 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms