RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 CYP2A7P20853 494 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 GPSM2P81274 684 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 RPL19P84098 196 aaKnown RBP19.75■□□□□ 0.75
HDAC4-215ENST00000543185 EZH2Q15910 746 aaKnown RBP19.75■□□□□ 0.75
HDAC4-215ENST00000543185 YIPF2Q9BWQ6 316 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 DOLKQ9UPQ8 538 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 C5orf22Q49AR2 442 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 FAM49BQ9NUQ9 324 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 TNS3Q68CZ2 1445 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 CHP2O43745 196 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 ZCCHC2Q9C0B9 1178 aaKnown RBP19.75■□□□□ 0.75
HDAC4-215ENST00000543185 N4BP2L1Q5TBK1 243 aaPredicted RBP19.75■□□□□ 0.75
HDAC4-215ENST00000543185 BHLHB9Q6PI77 547 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 MOXD1Q6UVY6 613 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 MAGEC3Q8TD91 643 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 EFR3BQ9Y2G0 817 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 MYO3AQ8NEV4 1616 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 B3GALNT2Q8NCR0 500 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 ZNF75CPQ92670 426 aaPredicted RBP19.75■□□□□ 0.75
HDAC4-215ENST00000543185 NLNQ9BYT8 704 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 NPHP3-ACAD11A0A0J9YXS1 232 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 CCDC189A1A4V9 331 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 SQLEQ14534 574 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 STK40Q8N2I9 435 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 LRMDAQ9H2I8 198 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 HACD1B0YJ81 288 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 ZNF276Q8N554 614 aa19.75■□□□□ 0.75
HDAC4-215ENST00000543185 A0A088AWK7 358 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 RGS14O43566 566 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 CAMTA2O94983 1202 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 VIL1P09327 827 aaKnown RBP19.74■□□□□ 0.75
HDAC4-215ENST00000543185 ZNF10P21506 573 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-215ENST00000543185 PDK3Q15120 406 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 CIAPIN1Q6FI81 312 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 OR6B1O95007 311 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 AP3S2P59780 193 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 C11orf74Q86VG3 221 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 AGPAT3Q9NRZ7 376 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 SNX8Q9Y5X2 465 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 COL15A1P39059 1388 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 MED24O75448 989 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 POLR2EP19388 210 aaKnown RBP19.74■□□□□ 0.75
HDAC4-215ENST00000543185 ST3GAL1Q11201 340 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 FAM92BQ6ZTR7 304 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 SRBD1Q8N5C6 995 aaKnown RBP19.74■□□□□ 0.75
HDAC4-215ENST00000543185 IGDCC4Q8TDY8 1250 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 PRCCQ92733 491 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-215ENST00000543185 TPD52L3Q96J77 140 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 DPY30Q9C005 99 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 PRRG1O14668 218 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 ACAP1Q15027 740 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 FBXO25Q8TCJ0 367 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 LIMD1Q9UGP4 676 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 ZNF543Q08ER8 600 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 EEF1AKMT1Q8WVE0 214 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 HPS4Q9NQG7 708 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 A1CFQ9NQ94 594 aaKnown RBP19.74■□□□□ 0.75
HDAC4-215ENST00000543185 PRDM8Q9NQV8 689 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 PRKAG3Q9UGI9 489 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 TULP4Q9NRJ4 1543 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 RASSF6Q6ZTQ3 369 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 ACTR8Q9H981 624 aa19.74■□□□□ 0.75
HDAC4-215ENST00000543185 GP5P40197 560 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 CD151P48509 253 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 ZFP69Q49AA0 526 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 FBXO39Q8N4B4 442 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 SLC39A8Q9C0K1 460 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 MYBP10242 640 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 GPR15P49685 360 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 RGS7P49802 495 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 SBK1Q52WX2 424 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 KCNMB4Q86W47 210 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 WDR48Q8TAF3 677 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 PLEKHG4BQ96PX9 1271 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 GPN1Q9HCN4 374 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-215ENST00000543185 MFHAS1Q9Y4C4 1052 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 ASTN2O75129 1339 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-215ENST00000543185 F5H5T6 163 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 KHDRBS3O75525 346 aaKnown RBP19.73■□□□□ 0.75
HDAC4-215ENST00000543185 TDRD10Q5VZ19 366 aaKnown RBP19.73■□□□□ 0.75
HDAC4-215ENST00000543185 PLA2G12BQ9BX93 195 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 TMEM138Q9NPI0 162 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 DLG5Q8TDM6 1919 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 A0A087X0T9 212 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 FAM228BP0C875 321 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 SLC44A2Q8IWA5 706 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-215ENST00000543185 SPIRE2Q8WWL2 714 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 DGCR6LQ9BY27 220 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 TRHDEQ9UKU6 1024 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 RHAGQ02094 409 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 TAS2R13Q9NYV9 303 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 MINPP1Q9UNW1 487 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 BAIAP2Q9UQB8 552 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 INVSQ9Y283 1065 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 ATF6P18850 670 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 UBE2E3Q969T4 207 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 GDF3Q9NR23 364 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 OVOS2A0A0J9YW53 1432 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 OVOS2Q6IE36 1432 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 PTSQ03393 145 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms