RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 SNX27Q96L92 541 aa6.96□□□□□ -1.29
NKRF-204ENST00000542113 BTBD9Q96Q07 612 aa6.96□□□□□ -1.29
NKRF-204ENST00000542113 RTKNQ9BST9 563 aa6.96□□□□□ -1.29
NKRF-204ENST00000542113 FZD10Q9ULW2 581 aa6.96□□□□□ -1.29
NKRF-204ENST00000542113 ANKRD6Q9Y2G4 727 aa6.96□□□□□ -1.29
NKRF-204ENST00000542113 SLC4A7Q9Y6M7 1214 aa6.96□□□□□ -1.29
NKRF-204ENST00000542113 SPDYE5A6NIY4 337 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 XPO1O14980 1071 aaKnown RBP6.96□□□□□ -1.3
NKRF-204ENST00000542113 PSMD3O43242 534 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 MAP3K6O95382 1288 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 ITGBL1O95965 494 aaPredicted RBP6.96□□□□□ -1.3
NKRF-204ENST00000542113 PGK2P07205 417 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 MGAT1P26572 445 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 MAGEA12P43365 314 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 IDH3AP50213 366 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 LIMK2P53671 638 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 ARHGAP1Q07960 439 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 SLC10A2Q12908 348 aaPredicted RBP6.96□□□□□ -1.3
NKRF-204ENST00000542113 TUBB3Q13509 450 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 PAFAH1B3Q15102 231 aaKnown RBP6.96□□□□□ -1.3
NKRF-204ENST00000542113 INTS6LQ5JSJ4 861 aaKnown RBP6.96□□□□□ -1.3
NKRF-204ENST00000542113 NOTUMQ6P988 496 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 PGM2L1Q6PCE3 622 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 TMEM126BQ8IUX1 230 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 C7orf31Q8N865 590 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.96□□□□□ -1.3
NKRF-204ENST00000542113 RNF139Q8WU17 664 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 SLC9A7Q96T83 725 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 RBBP8Q99708 897 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 EBF4Q9BQW3 602 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 RNPEPQ9H4A4 650 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 MTMR10Q9NXD2 777 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 CDH22Q9UJ99 828 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 EMCNQ9ULC0 261 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 USP3Q9Y6I4 520 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 RPS6KL1Q9Y6S9 549 aa6.96□□□□□ -1.3
NKRF-204ENST00000542113 RRN3P2A6NIE6 340 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 CNMDO75829 334 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 USP1O94782 785 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 FAM163BP0C2L3 166 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 THRAP10827 490 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 GOT1P17174 413 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 KCNA4P22459 653 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 NOS2P35228 1153 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 CCNA1P78396 465 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 SV2CQ496J9 727 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 RAB6CQ53S08 254 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 FBXO47Q5MNV8 452 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 ZFP1Q6P2D0 407 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 C10orf107Q8IVU9 208 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 GPC2Q8N158 579 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 CCNYQ8ND76 341 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 SLC26A7Q8TE54 656 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 DTNBP1Q96EV8 351 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 P2RY11Q96G91 374 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 VAT1Q99536 393 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 RAB6CQ9H0N0 254 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 CDH19Q9H159 772 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 SNX15Q9NRS6 342 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 C6orf203Q9P0P8 240 aaPredicted RBP6.95□□□□□ -1.3
NKRF-204ENST00000542113 KLHL8Q9P2G9 620 aaPredicted RBP6.95□□□□□ -1.3
NKRF-204ENST00000542113 TRHDEQ9UKU6 1024 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 FZD1Q9UP38 647 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 EIF4E1BA6NMX2 242 aaKnown RBP6.95□□□□□ -1.3
NKRF-204ENST00000542113 MFSD11O43934 449 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 TRIM13O60858 407 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 FBXO21O94952 628 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 VTNP04004 478 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 LCP1P13796 627 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 VAV1P15498 845 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 NCF2P19878 526 aaPredicted RBP6.95□□□□□ -1.3
NKRF-204ENST00000542113 AXLP30530 894 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 SERPINB6P35237 376 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 GNL1P36915 607 aaPredicted RBP6.95□□□□□ -1.3
NKRF-204ENST00000542113 NPY2RP49146 381 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 C11orf91Q3C1V1 193 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 DPY19L2Q6NUT2 758 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 C16orf46Q6P387 395 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 CATSPER4Q7RTX7 472 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 PDSS2Q86YH6 399 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 FBXW8Q8N3Y1 598 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 FAM149B1Q96BN6 582 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 PPP1R2P1Q96PQ5 205 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 GDAP2Q9NXN4 497 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 RRN3Q9NYV6 651 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 HACD3Q9P035 362 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 VTI1BQ9UEU0 232 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 RALGAPA2Q2PPJ7 1873 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 PLXNA1Q9UIW2 1896 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 UNCXA6NJT0 531 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 EEF2KO00418 725 aaKnown RBP6.95□□□□□ -1.3
NKRF-204ENST00000542113 AP2A1O95782 977 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 GSRP00390 522 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 COX4I1P13073 169 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 UQCRBP14927 111 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 PSMB4P28070 264 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 ADORA2BP29275 332 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 HSPA13P48723 471 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 POLD2P49005 469 aa6.95□□□□□ -1.3
NKRF-204ENST00000542113 KPNA2P52292 529 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms