RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 NOP9Q86U38 636 aaKnown RBP9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 PIGZQ86VD9 579 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 VSTM4Q8IW00 320 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 GALNT15Q8N3T1 639 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 ZNF397Q8NF99 534 aaPredicted RBP9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 SYN2Q92777 582 aaPredicted RBP9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 MRFAP1L1Q96HT8 127 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 CDC6Q99741 560 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 GABRG3Q99928 467 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 PLK2Q9NYY3 685 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 GMIPQ9P107 970 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 KIAA1522Q9P206 1035 aaPredicted RBP9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 NOCTQ9UK39 431 aaKnown RBP9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 LSM7Q9UK45 103 aaKnown RBP9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 CAPN11Q9UMQ6 739 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 SCML2Q9UQR0 700 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 FNDC3AQ9Y2H6 1198 aaKnown RBP9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 CEP83Q9Y592 693 aa9.07□□□□□ -0.96
CLSTN3-212ENST00000541770 A0A1B0GVT2 93 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 LRRC53A6NM62 1247 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 FLRT2O43155 660 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 LSM8O95777 96 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 GYPCP04921 128 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 ZDHHC11BP0C7U3 371 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 ACADMP11310 421 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 PRKCIP41743 596 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 ACADSBP45954 432 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 CDR2Q01850 454 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 GOLGA8FQ08AF8 430 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 GOLGA8DPQ0D2H9 430 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 SUZ12Q15022 739 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 FUT11Q495W5 492 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 SFMBT2Q5VUG0 894 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 PM20D1Q6GTS8 502 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 PMF1Q6P1K2 205 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 DENND1BQ6P3S1 775 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 IL27RAQ6UWB1 636 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 IRF2BP2Q7Z5L9 587 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 TMEM110Q86TL2 294 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 FAM124AQ86V42 546 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 ZNF276Q8N554 614 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 WDTC1Q8N5D0 677 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 SLC39A7Q92504 469 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 UBL7Q96S82 380 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 SLC4A5Q9BY07 1137 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 LRRC4Q9HBW1 653 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 CNGB3Q9NQW8 809 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 TLR8Q9NR97 1041 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 TOR4AQ9NXH8 423 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 WSB2Q9NYS7 404 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 WDR35Q9P2L0 1181 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 EIF2B4Q9UI10 523 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 BTBD3Q9Y2F9 522 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 LUC7L2Q9Y383 392 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 STON1Q9Y6Q2 735 aa9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 MUC22E2RYF6 1773 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-212ENST00000541770 KCNK3O14649 394 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 CACNG3O60359 315 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 SYNCRIPO60506 623 aaKnown RBP9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 TLR5O60602 858 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 GABBR2O75899 941 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 FBXO21O94952 628 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 ZBED1O96006 694 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 CYP1A1P04798 512 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 MMEP08473 750 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 TPM1P09493 284 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 CHRNB2P17787 502 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 CASP14P31944 242 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 CSNK1EP49674 416 aaKnown RBP9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 PSEN1P49768 467 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 TUBP50607 506 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 TPMTP51580 245 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 ZNF75DP51815 510 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 TKTL1P51854 596 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 SNX16P57768 344 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 FMO1Q01740 532 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 PDCLQ13371 301 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 ARID5BQ14865 1188 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 ASIC2Q16515 512 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 TAF3Q5VWG9 929 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 DHRS13Q6UX07 377 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 TRIM72Q6ZMU5 477 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 TMPRSS6Q8IU80 811 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 SCUBE3Q8IX30 993 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 SIX6OS1Q8N1H7 587 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 ARHGAP18Q8N392 663 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 TMEM35BQ8NCS4 154 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 DNASE2BQ8WZ79 361 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 IRGQQ8WZA9 623 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 PRCCQ92733 491 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 SIPA1Q96FS4 1042 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 NOX5Q96PH1 765 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 SYT11Q9BT88 431 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 ULBP1Q9BZM6 244 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 PDCL3Q9H2J4 239 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 CD248Q9HCU0 757 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 ITM2CQ9NQX7 267 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 CYTH4Q9UIA0 394 aa9.05□□□□□ -0.96
CLSTN3-212ENST00000541770 BZW2Q9Y6E2 419 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms