RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 UGCGQ16739 394 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 MGAT5BQ3V5L5 792 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 LRRC38Q5VT99 294 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 TTC39BQ5VTQ0 682 aaPredicted RBP5.37□□□□□ -1.55
PROM1-220ENST00000540805 ELMSAN1Q6PJG2 1045 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 PHF13Q86YI8 300 aaPredicted RBP5.37□□□□□ -1.55
PROM1-220ENST00000540805 NUDCD3Q8IVD9 361 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 POU5F2Q8N7G0 328 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 Q8N9G6 341 aaPredicted RBP5.37□□□□□ -1.55
PROM1-220ENST00000540805 TMEM35BQ8NCS4 154 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 SLC35B2Q8TB61 432 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 SYTL5Q8TDW5 730 aaPredicted RBP5.37□□□□□ -1.55
PROM1-220ENST00000540805 HASPINQ8TF76 798 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 SEPT5Q99719 369 aaPredicted RBP5.37□□□□□ -1.55
PROM1-220ENST00000540805 MRPS26Q9BYN8 205 aaKnown RBP5.37□□□□□ -1.55
PROM1-220ENST00000540805 ZNF395Q9H8N7 513 aaPredicted RBP5.37□□□□□ -1.55
PROM1-220ENST00000540805 TIMMDC1Q9NPL8 285 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 SORCS3Q9UPU3 1222 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 DMTF1Q9Y222 760 aa5.37□□□□□ -1.55
PROM1-220ENST00000540805 HBS1LQ9Y450 684 aaKnown RBP5.37□□□□□ -1.55
PROM1-220ENST00000540805 LAMA2P24043 3122 aaKnown RBP5.37□□□□□ -1.55
PROM1-220ENST00000540805 ARHGAP10A1A4S6 786 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MCF2LO15068 1137 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MED7O43513 233 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 GPC4O75487 556 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SPAG6O75602 509 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 KRT37O76014 449 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PDE5AO76074 875 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ZBED1O96006 694 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CCNE2O96020 404 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 AOC1P19801 751 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 IGFBP4P22692 258 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MZF1P28698 734 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 GNA15P30679 374 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SFNP31947 248 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 RPL22P35268 128 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 CPOXP36551 454 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 NNMTP40261 264 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ELK3P41970 407 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CASP2P42575 452 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ENTPD1P49961 510 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 COPAP53621 1224 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 NCKAP1LP55160 1127 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 HDAC4P56524 1084 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PSMC1P62191 440 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 OTUD4Q01804 1114 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 PEX6Q13608 980 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CCNIQ14094 377 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 DUOXA2Q1HG44 320 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 NADK2Q4G0N4 442 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 HSF5Q4G112 596 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 RABGAP1LQ5R372 815 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PPP4R4Q6NUP7 873 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 EFCAB12Q6NXP0 572 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 RNF180Q86T96 592 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ABRAQ8N0Z2 381 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ELMOD1Q8N336 334 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 IRGQQ8WZA9 623 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ACSF2Q96CM8 615 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 CCDC124Q96CT7 223 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 CDCA5Q96FF9 252 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MXRA8Q9BRK3 442 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 AGO4Q9HCK5 861 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 OLA1Q9NTK5 396 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 GPRC5DQ9NZD1 345 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PLLPQ9Y342 182 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MICAL3Q7RTP6 2002 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SF3B1O75533 1304 aaKnown RBP eCLIP5.36□□□□□ -1.55
PROM1-220ENST00000540805 ZSWIM8A7E2V4 1837 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 TCRBV7S3A2A0A539 114 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 TCRBV9S1A1TA0A576 114 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CASQ2O14958 399 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 KLHL2O95198 593 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ZBTB11O95625 1053 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 SNRPAP09012 282 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 WEE2P0C1S8 567 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 WEE1P30291 646 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 FDFT1P37268 417 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 GRIK1P39086 918 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CDKN2BP42772 138 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 RARRES1P49788 294 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ATXN3P54252 364 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 GDF10P55107 478 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 WASHC5Q12768 1159 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SREBF2Q12772 1141 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 DCTN2Q13561 401 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 PGM5Q15124 567 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ANO4Q32M45 955 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MYLK3Q32MK0 819 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CCDC92Q53HC0 331 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 TEX44Q53QW1 395 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 XKR3Q5GH77 459 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 HABP4Q5JVS0 413 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 NOL9Q5SY16 702 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 IER5Q5VY09 327 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 OGFOD2Q6N063 350 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CDHR3Q6ZTQ4 885 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SH2D5Q6ZV89 423 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 TMC7Q7Z402 723 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SLC26A11Q86WA9 606 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms