RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 PRR11Q96HE9 360 aaPredicted RBP8.32□□□□□ -1.08
LRP6-204ENST00000540415 FAM129BQ96TA1 746 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 MYOCQ99972 504 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 OMDQ99983 421 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 DUSP16Q9BY84 665 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 DPH1Q9BZG8 443 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 FAM117AQ9C073 453 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 ERVMER34-1Q9H9K5 563 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 APOBEC3GQ9HC16 384 aaKnown RBP8.32□□□□□ -1.08
LRP6-204ENST00000540415 PNPLA8Q9NP80 782 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 STIM2Q9P246 746 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 ANKMY1Q9P2S6 941 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 SUN2Q9UH99 717 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 SFMBT1Q9UHJ3 866 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 SATB2Q9UPW6 733 aa8.32□□□□□ -1.08
LRP6-204ENST00000540415 SRPRBQ9Y5M8 271 aaKnown RBP8.32□□□□□ -1.08
LRP6-204ENST00000540415 HEMK1Q9Y5R4 338 aaPredicted RBP8.32□□□□□ -1.08
LRP6-204ENST00000540415 TLN1Q9Y490 2541 aaKnown RBP8.32□□□□□ -1.08
LRP6-204ENST00000540415 NOTCH2Q04721 2471 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3DA0A087WVF3 549 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3IA0A087WXS9 549 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3EA0A087X179 549 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3KA0A087X1G2 549 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3FA6NER0 549 aaPredicted RBP8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3LB9A6J9 549 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 EIF3DO15371 548 aaKnown RBP eCLIP8.31□□□□□ -1.08
LRP6-204ENST00000540415 LATO43561 262 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 EXOC3O60645 756 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBL1XO60907 577 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 RTN2O75298 545 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3HP0C7X1 549 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 VAV1P15498 845 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 DGKAP23743 735 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 SLC6A4P31645 630 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 DRD3P35462 400 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 ASIC1P78348 528 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 PDE4CQ08493 712 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 INCA1Q0VD86 236 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 CLN3Q13286 438 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 ZSCAN23Q3MJ62 389 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 ZNF394Q53GI3 561 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 FAM26FQ5R3K3 315 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 C1orf220Q5T0J3 134 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3GQ6DHY5 549 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3CQ6IPX1 549 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 NAPEPLDQ6IQ20 393 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 FOXR1Q6PIV2 292 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 CRTC1Q6UUV9 634 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.31□□□□□ -1.08
LRP6-204ENST00000540415 CCDC73Q6ZRK6 1079 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TBC1D3Q8IZP1 549 aaPredicted RBP8.31□□□□□ -1.08
LRP6-204ENST00000540415 LSMEM2Q8N112 164 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 STK40Q8N2I9 435 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 MFSD2AQ8NA29 543 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 OR4C6Q8NH72 309 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 EDEM1Q92611 657 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 EXTL1Q92935 676 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 PLD4Q96BZ4 506 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 ATXN7L3BQ96GX2 97 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 TMX3Q96JJ7 454 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 DEPDC7Q96QD5 511 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 CDK5RAP1Q96SZ6 601 aaKnown RBP8.31□□□□□ -1.08
LRP6-204ENST00000540415 THSD1Q9NS62 852 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 WDR70Q9NW82 654 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 SLCO3A1Q9UIG8 710 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 STRIP2Q9ULQ0 834 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 FZD4Q9ULV1 537 aa8.31□□□□□ -1.08
LRP6-204ENST00000540415 ARID1BQ8NFD5 2236 aaPredicted RBP8.3□□□□□ -1.08
LRP6-204ENST00000540415 DOPEY2Q9Y3R5 2298 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 STX6O43752 255 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 RNASEH1O60930 286 aaKnown RBP8.3□□□□□ -1.08
LRP6-204ENST00000540415 NEBLO76041 1014 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 ASS1P00966 412 aaKnown RBP8.3□□□□□ -1.08
LRP6-204ENST00000540415 HLA-DRAP01903 254 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 ATP5BP06576 529 aaKnown RBP8.3□□□□□ -1.08
LRP6-204ENST00000540415 CKMT1AP12532 417 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 GOT1P17174 413 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 ITGB6P18564 788 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 TGM2P21980 687 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 TXLNAP40222 546 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 HARS2P49590 506 aaKnown RBP8.3□□□□□ -1.08
LRP6-204ENST00000540415 STK19P49842 368 aaPredicted RBP8.3□□□□□ -1.08
LRP6-204ENST00000540415 CLDN10P78369 228 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 DRAP1Q14919 205 aaPredicted RBP8.3□□□□□ -1.08
LRP6-204ENST00000540415 ISXQ2M1V0 245 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 SGSM1Q2NKQ1 1148 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 ARL13BQ3SXY8 428 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 ZACNQ401N2 412 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 SLC45A4Q5BKX6 768 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 FAM133BQ5BKY9 247 aaKnown RBP8.3□□□□□ -1.08
LRP6-204ENST00000540415 ZNF542PQ5EBM4 170 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 FSCBQ5H9T9 825 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 ADGRF1Q5T601 910 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 PIK3R6Q5UE93 754 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 CCDC81Q6ZN84 652 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 STXBP4Q6ZWJ1 553 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 SND1Q7KZF4 910 aaKnown RBP eCLIP8.3□□□□□ -1.08
LRP6-204ENST00000540415 SV2AQ7L0J3 742 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 BRAPQ7Z569 592 aa8.3□□□□□ -1.08
LRP6-204ENST00000540415 PIGZQ86VD9 579 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms