RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ASLP04424 464 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 GYPCP04921 128 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 DLDP09622 509 aaKnown RBP13.83□□□□□ -0.2
CCDC130-202ENST00000540216 DESP17661 470 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 POLR2EP19388 210 aaKnown RBP13.83□□□□□ -0.2
CCDC130-202ENST00000540216 HOXC13P31276 330 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 CD70P32970 193 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 LMAN2Q12907 356 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 SLC12A1Q13621 1099 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 BYSLQ13895 437 aaKnown RBP13.83□□□□□ -0.2
CCDC130-202ENST00000540216 ZNF234Q14588 700 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 CCDC14Q49A88 953 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
CCDC130-202ENST00000540216 TMEM215Q68D42 235 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 MBLAC2Q68D91 279 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 SERPINA13PQ6UXR4 307 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 LRRC31Q6UY01 552 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 PRR23BQ6ZRT6 265 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 ZNF571Q7Z3V5 609 aaPredicted RBP13.83□□□□□ -0.2
CCDC130-202ENST00000540216 VPS36Q86VN1 386 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 CCAR2Q8N163 923 aaKnown RBP13.83□□□□□ -0.2
CCDC130-202ENST00000540216 CFAP52Q8N1V2 620 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 RNF214Q8ND24 703 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 JOSD2Q8TAC2 188 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 TRIM11Q96F44 468 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 LMLNQ96KR4 655 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 HAPLN3Q96S86 360 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 PPP1R9BQ96SB3 815 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 CD248Q9HCU0 757 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 KIAA1522Q9P206 1035 aaPredicted RBP13.83□□□□□ -0.2
CCDC130-202ENST00000540216 PLA2G4CQ9UP65 541 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 HS3ST4Q9Y661 456 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 GPR179Q6PRD1 2367 aa13.83□□□□□ -0.2
CCDC130-202ENST00000540216 MUC22E2RYF6 1773 aaPredicted RBP13.82□□□□□ -0.2
CCDC130-202ENST00000540216 DDX3XO00571 662 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC130-202ENST00000540216 SYNCRIPO60506 623 aaKnown RBP13.82□□□□□ -0.2
CCDC130-202ENST00000540216 CLDN11O75508 207 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 SERPING1P05155 500 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 GPD1P21695 349 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 RFC1P35251 1148 aaPredicted RBP13.82□□□□□ -0.2
CCDC130-202ENST00000540216 WASP42768 502 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 ZNF143P52747 638 aaPredicted RBP13.82□□□□□ -0.2
CCDC130-202ENST00000540216 ATP11AP98196 1134 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 SRSF5Q13243 272 aaKnown RBP13.82□□□□□ -0.2
CCDC130-202ENST00000540216 ARL13BQ3SXY8 428 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 FUT11Q495W5 492 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 PITRM1Q5JRX3 1037 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 PPP1R15BQ5SWA1 713 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 HGSNATQ68CP4 663 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 SPECC1LQ69YQ0 1117 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
CCDC130-202ENST00000540216 FAM131BQ86XD5 332 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 KDM1BQ8NB78 822 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 HMGB4Q8WW32 186 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 CENPIQ92674 756 aaPredicted RBP13.82□□□□□ -0.2
CCDC130-202ENST00000540216 TTC17Q96AE7 1141 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 SPACA7Q96KW9 195 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 SIK2Q9H0K1 926 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 PARVAQ9NVD7 372 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 TAS2R14Q9NYV8 317 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 NCDNQ9UBB6 729 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 GMEB2Q9UKD1 530 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 VANGL2Q9ULK5 521 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 EML5Q05BV3 1969 aa13.82□□□□□ -0.2
CCDC130-202ENST00000540216 EP300Q09472 2414 aaPredicted RBP13.81□□□□□ -0.2
CCDC130-202ENST00000540216 GVINP1Q7Z2Y8 2422 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 IGLV3-10A0A075B6K4 115 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.81□□□□□ -0.2
CCDC130-202ENST00000540216 RTN2O75298 545 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 MYBL1P10243 752 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 SKILP12757 684 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 GABRG2P18507 467 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 RRM1P23921 792 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 HNRNPH3P31942 346 aaKnown RBP13.81□□□□□ -0.2
CCDC130-202ENST00000540216 IL12RB1P42701 662 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 ATXN1P54253 815 aaKnown RBP13.81□□□□□ -0.2
CCDC130-202ENST00000540216 CDH4P55283 916 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 ZNF177Q13360 481 aaPredicted RBP13.81□□□□□ -0.2
CCDC130-202ENST00000540216 C15orf59Q2T9L4 293 aaPredicted RBP13.81□□□□□ -0.2
CCDC130-202ENST00000540216 PLEKHG6Q3KR16 790 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 FNDC3BQ53EP0 1204 aaKnown RBP13.81□□□□□ -0.2
CCDC130-202ENST00000540216 FSCBQ5H9T9 825 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 PLEKHA7Q6IQ23 1121 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 KIAA1211LQ6NV74 962 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 DCUN1D2Q6PH85 259 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 WDR59Q6PJI9 974 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 PHLDB2Q86SQ0 1253 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 ZNF683Q8IZ20 524 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 PGBD3Q8N328 593 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 FAM172AQ8WUF8 416 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 CPLX3Q8WVH0 158 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 SORCS1Q8WY21 1168 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 IGSF8Q969P0 613 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 LOXL4Q96JB6 756 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 ZC3H10Q96K80 434 aaKnown RBP13.81□□□□□ -0.2
CCDC130-202ENST00000540216 MCEEQ96PE7 176 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 CNPY3Q9BT09 278 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 TPSD1Q9BZJ3 242 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 TMEM245Q9H330 911 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 FBRSQ9HAH7 460 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms