RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SMG5Q9UPR3 1016 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 INVSQ9Y283 1065 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 ITIH6Q6UXX5 1313 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 TCRBV21S2A2A0A5A6 115 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 TYW5A2RUC4 315 aaKnown RBP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 DCLK1O15075 740 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 AP5Z1O43299 807 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 PLEKP08567 350 aaPredicted RBP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 CASP14P31944 242 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 CNR2P34972 360 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 RDXP35241 583 aaKnown RBP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 PTPN9P43378 593 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 RPL7AP62424 266 aaKnown RBP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 SIM2Q14190 667 aaPredicted RBP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 EIF4HQ15056 248 aaKnown RBP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 CDO1Q16878 200 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 MBLAC2Q68D91 279 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 SND1Q7KZF4 910 aaKnown RBP eCLIP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 AHI1Q8N157 1196 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 CCAR2Q8N163 923 aaKnown RBP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 WFIKKN2Q8TEU8 576 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 HMGB4Q8WW32 186 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 GAB3Q8WWW8 586 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 SYN2Q92777 582 aaPredicted RBP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 POLMQ9NP87 494 aaPredicted RBP18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 WDR87Q6ZQQ6 2873 aa18.9■□□□□ 0.62
SNRPA1-203ENST00000540017 MUC22E2RYF6 1773 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 GPR179Q6PRD1 2367 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 ATMINO43313 823 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 TIMM44O43615 452 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 RPP40O75818 363 aaKnown RBP18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 GABRG2P18507 467 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 PRKCHP24723 683 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 SDC4P31431 198 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 CDH18Q13634 790 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 PTPRNQ16849 979 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 C5orf22Q49AR2 442 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 SDE2Q6IQ49 451 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 DNAJC24Q6P3W2 148 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 PRR23BQ6ZRT6 265 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 OR52K2Q8NGK3 314 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 UCMAQ8WVF2 138 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 CENPIQ92674 756 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 RPRD1AQ96P16 312 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 MCEEQ96PE7 176 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 MAGEB5Q9BZ81 275 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 SLC6A17Q9H1V8 727 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 LUC7L2Q9Y383 392 aaKnown RBP18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 PIEZO1Q92508 2521 aa18.89■□□□□ 0.61
SNRPA1-203ENST00000540017 H0Y626 953 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 CBFA2T2O43439 604 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 CNTN5O94779 1100 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 ALDH1A2O94788 518 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 FTLP02792 175 aaPredicted RBP18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 GZMAP12544 262 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 GPD1P21695 349 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 NUMBP49757 651 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 HDAC4P56524 1084 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 OGDHQ02218 1023 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 MTA1Q13330 715 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 TDRD12Q587J7 1177 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 RABGAP1LQ5R372 815 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 CXorf57Q6NSI4 855 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 KBTBD6Q86V97 674 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 APCDD1Q8J025 514 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 DCLK2Q8N568 766 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 FRMD1Q8N878 549 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 RLN3Q8WXF3 142 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 TTC17Q96AE7 1141 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 IQCDQ96DY2 449 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 VCPIP1Q96JH7 1222 aa18.88■□□□□ 0.61
SNRPA1-203ENST00000540017 A0A1B0GVM2 712 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 TCAF2A6NFQ2 919 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 NPC1O15118 1278 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 CCP110O43303 1012 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 RTN2O75298 545 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 TPM3P06753 285 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 HLA-EP13747 358 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 POLR2EP19388 210 aaKnown RBP18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 NDUFV2P19404 249 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 MZF1P28698 734 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 CSKP41240 450 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 CTSOP43234 321 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 MAMLD1Q13495 774 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 ALFQ53S48 1182 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 PITRM1Q5JRX3 1037 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 TTC39BQ5VTQ0 682 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 SPECC1LQ69YQ0 1117 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 PLEKHA7Q6IQ23 1121 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 CEP68Q76N32 757 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 STRADAQ7RTN6 431 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 VSTM4Q8IW00 320 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 ZNF366Q8N895 744 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 ZNF557Q8N988 423 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 FAM172AQ8WUF8 416 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 MYO19Q96H55 970 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 C1orf74Q96LT6 269 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 HAPLN3Q96S86 360 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 TMEM245Q9H330 911 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 BCCIPQ9P287 314 aaKnown RBP eCLIP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms