RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 AP3M1Q9Y2T2 418 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 PCDHGA3Q9Y5H0 932 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 GOLGA8QA0A0J9YX86 632 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 GOLGA8OA6NCC3 632 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 FAM86C2PA6NEL3 165 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 SIGLEC16A6NMB1 481 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 GOLGA8NF8WBI6 632 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 SNX4O95219 450 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 RASGRP1O95267 797 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 SNAI1O95863 264 aaPredicted RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 EIF4A3P38919 411 aaKnown RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 CD86P42081 329 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 NPTX2P47972 431 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 CLK3P49761 638 aaKnown RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 CENPCQ03188 943 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 CDC20Q12834 499 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 KCNT1Q5JUK3 1230 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 GLRX5Q86SX6 157 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 HEATR4Q86WZ0 1026 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 ABRAQ8N0Z2 381 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 PPHLN1Q8NEY8 458 aaKnown RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 AENQ8WTP8 325 aaKnown RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 PMEPA1Q969W9 287 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 TOX2Q96NM4 488 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 KIFC3Q9BVG8 833 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 GANQ9H2C0 597 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 C17orf75Q9HAS0 396 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 MRM3Q9HC36 420 aaKnown RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 CYP4F12Q9HCS2 524 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 EHD3Q9NZN3 535 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 ATP6V1HQ9UI12 483 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 DENND3A2RUS2 1198 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 SOBPA7XYQ1 873 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 CAPN14A8MX76 684 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 TISP43B9A030 160 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 SLC9A3R1O14745 358 aaPredicted RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 MAPK13O15264 365 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 KRT86O43790 486 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 GGPS1O95749 300 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 IFNA14P01570 189 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 TPBGLP0DKB5 382 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 ACTN1P12814 892 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 BMP1P13497 986 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 ZNF12P17014 697 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 PON1P27169 355 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 CYP27A1Q02318 531 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 DHX9Q08211 1270 aaKnown RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 CSTF3Q12996 717 aaKnown RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 PPIGQ13427 754 aaKnown RBP eCLIP12.93□□□□□ -0.344e-6■□□□□ 11.2
DDX55-206ENST00000539934 RCN2Q14257 317 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 GNASQ5JWF2 1037 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 NIPAL1Q6NVV3 410 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 SLC9A6Q92581 669 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 SYN2Q92777 582 aaPredicted RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■■□ 20.7
DDX55-206ENST00000539934 PBXIP1Q96AQ6 731 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 C11orf24Q96F05 449 aaPredicted RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 OPALINQ96PE5 141 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 C9orf16Q9BUW7 83 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 GHITMQ9H3K2 345 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 VPS37BQ9H9H4 285 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 MLXIPQ9HAP2 919 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 ARHGEF3Q9NR81 526 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 MSRAQ9UJ68 235 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 APOBEC2Q9Y235 224 aaKnown RBP12.93□□□□□ -0.34
DDX55-206ENST00000539934 CACNG2Q9Y698 323 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 CFAP54Q96N23 3096 aa12.93□□□□□ -0.34
DDX55-206ENST00000539934 STMND1H3BQB6 276 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 PLOD2O00469 737 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 ETS2P15036 469 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 FMO5P49326 533 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 SNRPFP62306 86 aaKnown RBP12.92□□□□□ -0.34
DDX55-206ENST00000539934 BFSP1Q12934 665 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 OASLQ15646 514 aaKnown RBP12.92□□□□□ -0.34
DDX55-206ENST00000539934 KLHDC7AQ5VTJ3 777 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 ADAMTSL2Q86TH1 951 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 SLC35F6Q8N357 371 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 RIBC1Q8N443 379 aaPredicted RBP12.92□□□□□ -0.34
DDX55-206ENST00000539934 XXYLT1Q8NBI6 393 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 KCT2Q8NC54 265 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 TMEM161BQ8NDZ6 487 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 KLHDC9Q8NEP7 349 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 BSNDQ8WZ55 320 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 USB1Q9BQ65 265 aaKnown RBP12.92□□□□□ -0.34
DDX55-206ENST00000539934 CBWD1Q9BRT8 395 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 BTBD2Q9BX70 525 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 INTS2Q9H0H0 1204 aaKnown RBP12.92□□□□□ -0.34
DDX55-206ENST00000539934 MARCH7Q9H992 704 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 XPNPEP1Q9NQW7 623 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 REV1Q9UBZ9 1251 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 TBX20Q9UMR3 447 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 SYNJ2BP-COX16A0A087WUM0 186 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 GSTTP1A0A1W2PQM5 241 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 PEX1O43933 1283 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 SERPING1P05155 500 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 TRIM49P0CI25 452 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 TRIM49CP0CI26 452 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 DLATP10515 647 aaKnown RBP12.92□□□□□ -0.34
DDX55-206ENST00000539934 UCHL3P15374 230 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms