RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 USP1O94782 785 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 C22orf31O95567 290 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 PRKCGP05129 697 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 IQCF3P0C7M6 154 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 NCF2P19878 526 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-209ENST00000539584 GRIA1P42261 906 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 EPHB1P54762 984 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 LSAMPQ13449 338 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 BIRC2Q13490 618 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 SLC5A9Q2M3M2 681 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 SFT2D3Q587I9 215 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 RALGPS1Q5JS13 557 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 SAMD7Q7Z3H4 446 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 CDR2LQ86X02 465 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-209ENST00000539584 LRRC52Q8N7C0 313 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 PNPOQ9NVS9 261 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 TMEM216Q9P0N5 145 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 RAB26Q9ULW5 256 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 ERI2A8K979 691 aaKnown RBP13.59□□□□□ -0.23
UBE3B-209ENST00000539584 AP3B1O00203 1094 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 ATP9BO43861 1147 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 CYP2C9P11712 490 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 RGS2P41220 211 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 HSPA13P48723 471 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 CLCN3P51790 818 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 LIMK2P53671 638 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 BCAT1P54687 386 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 BST2Q10589 180 aaKnown RBP13.59□□□□□ -0.23
UBE3B-209ENST00000539584 KLF10Q13118 480 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 PDK3Q15120 406 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 TRIP10Q15642 601 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 C12orf29Q8N999 325 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 ANKRD52Q8NB46 1076 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 RP9Q8TA86 221 aaKnown RBP13.59□□□□□ -0.23
UBE3B-209ENST00000539584 DLG3Q92796 817 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 KCTD15Q96SI1 283 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-209ENST00000539584 RBBP8Q99708 897 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 COG4Q9H9E3 785 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 GOLGA8QA0A0J9YX86 632 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 RGSL1A5PLK6 1076 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 GOLGA8OA6NCC3 632 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 GOLGA8NF8WBI6 632 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 PIK3R2O00459 728 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 TIMM44O43615 452 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 TRIM13O60858 407 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 ARIH2O95376 493 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 MAP3K6O95382 1288 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 HSPA4LO95757 839 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 RAG1P15918 1043 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 GLDCP23378 1020 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 DNAJB2P25686 324 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 MGAT1P26572 445 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 GRM5P41594 1212 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 GMPSP49915 693 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-209ENST00000539584 MSLNQ13421 630 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-209ENST00000539584 RARS2Q5T160 578 aaKnown RBP13.58□□□□□ -0.24
UBE3B-209ENST00000539584 RNF111Q6ZNA4 994 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 FRMD7Q6ZUT3 714 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 PDZD4Q76G19 769 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-209ENST00000539584 TRIM50Q86XT4 487 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 PQLC1Q8N2U9 271 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 POU5F2Q8N7G0 328 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 DGCR14Q96DF8 476 aaKnown RBP13.58□□□□□ -0.24
UBE3B-209ENST00000539584 BRD8Q9H0E9 1235 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 SNX15Q9NRS6 342 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 NSMCE4AQ9NXX6 385 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.58□□□□□ -0.24
UBE3B-209ENST00000539584 COL1A2P08123 1366 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 A0A0G2JMZ2 1700 aa13.58□□□□□ -0.24
UBE3B-209ENST00000539584 AP1G2O75843 785 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 TOP3BO95985 862 aaKnown RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 VAV1P15498 845 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 ARF4P18085 180 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 PEX2P28328 305 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 ADORA2AP29274 412 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 CSE1LP55060 971 aaKnown RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 AQP4P55087 323 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 HERC3Q15034 1050 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 DCAF4L1Q3SXM0 396 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 HSP90AA5PQ58FG0 334 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 UGT2A3Q6UWM9 527 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 TMEM135Q86UB9 458 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 CPSF7Q8N684 471 aaKnown RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 LINC01465Q8N7H1 131 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 SLC7A14Q8TBB6 771 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 NAT14Q8WUY8 206 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 OPTNQ96CV9 577 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 P2RY11Q96G91 374 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 ZFRQ96KR1 1074 aaKnown RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 MMP19Q99542 508 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 TRIM56Q9BRZ2 755 aaKnown RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 ILKAPQ9H0C8 392 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 TCF7L2Q9NQB0 619 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 HACD3Q9P035 362 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 VTI1BQ9UEU0 232 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 FZD10Q9ULW2 581 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 DTNAQ9Y4J8 743 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 RPS6KL1Q9Y6S9 549 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 H3BNX3 289 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms