RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 FAM72BQ86X60 149 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 MFN1Q8IWA4 741 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 MAP7D3Q8IWC1 876 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 ZNF683Q8IZ20 524 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 CCAR2Q8N163 923 aaKnown RBP13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 SIX5Q8N196 739 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 CARNMT1Q8N4J0 409 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 NAT16Q8N8M0 369 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 KCTD6Q8NC69 237 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 IGSF8Q969P0 613 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 TRIM44Q96DX7 344 aaPredicted RBP13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 KCTD15Q96SI1 283 aaPredicted RBP13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 P2RY13Q9BPV8 354 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 SLC2A11Q9BYW1 496 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 MAGEB5Q9BZ81 275 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 DNAJC17Q9NVM6 304 aaKnown RBP13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 TRMT1Q9NXH9 659 aaKnown RBP13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 DEC1Q9P2X7 70 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 PPARGC1AQ9UBK2 798 aaKnown RBP13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 AMFRQ9UKV5 643 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 CAPN6Q9Y6Q1 641 aa13.14□□□□□ -0.31
CDK2AP1-204ENST00000538446 HELZP42694 1942 aaKnown RBP13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 H0Y626 953 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 H3BRJ5 948 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 DAPK3O43293 454 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 TULP3O75386 442 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 LUC7L3O95232 432 aaKnown RBP13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 KRT1P04264 644 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 RHOQP17081 205 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 EPHB2P29323 1055 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 OPRD1P41143 372 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 DGKGP49619 791 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 CDH6P55285 790 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 SIGLEC14Q08ET2 396 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 ZNF177Q13360 481 aaPredicted RBP13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 PDK2Q15119 407 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 GAB4Q2WGN9 574 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 RNF43Q68DV7 783 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 GRAMD4Q6IC98 578 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 C12orf40Q86WS4 652 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 CIR1Q86X95 450 aaPredicted RBP13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 SUGP1Q8IWZ8 645 aaKnown RBP13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 REXO1L1PQ8IX06 675 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 ETFBKMTQ8IXQ9 262 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 TRIM58Q8NG06 486 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 UBE2Q2Q8WVN8 375 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 FAM3CQ92520 227 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 EDAQ92838 391 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 CD101Q93033 1021 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 PNKPQ96T60 521 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 RETREG1Q9H6L5 497 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 CATSPERBQ9H7T0 1116 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 PCDH18Q9HCL0 1135 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 DDX56Q9NY93 547 aaKnown RBP13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 MPP6Q9NZW5 540 aa13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 MRPS17Q9Y2R5 130 aaKnown RBP13.13□□□□□ -0.31
CDK2AP1-204ENST00000538446 CCDC66A2RUB6 948 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 LRRD1A4D1F6 860 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 KRBA1A5PL33 1030 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 MIF4GDA9UHW6 222 aaKnown RBP13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 FGF10O15520 208 aaPredicted RBP13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 CNTN5O94779 1100 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 FTCDO95954 541 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 HOXC13P31276 330 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 HCAR3P49019 387 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 IRAK1P51617 712 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 OXCT1P55809 520 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 KDSRQ06136 332 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 GRSF1Q12849 480 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 ATP13A4Q4VNC1 1196 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 ALFQ53S48 1182 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 HS1BP3Q53T59 392 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 IER5LQ5T953 404 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 TXNDC11Q6PKC3 985 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 ZNF852Q6ZMS4 543 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 RFX8Q6ZV50 586 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 TFAP2DQ7Z6R9 452 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 NT5DC3Q86UY8 548 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 FIBINQ8TAL6 211 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 CHFRQ96EP1 664 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 CALN1Q9BXU9 219 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 ARHGEF4Q9NR80 690 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 KLHL11Q9NVR0 708 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 DONSONQ9NYP3 566 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 RCOR3Q9P2K3 495 aaPredicted RBP13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 FBXO10Q9UK96 956 aa13.12□□□□□ -0.31
CDK2AP1-204ENST00000538446 KIF5CO60282 957 aa13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 KAT7O95251 611 aa13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 APODP05090 189 aa13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 GOT1P17174 413 aa13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 CTNNA2P26232 953 aa13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 OR1E1P30953 314 aa13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 CTNNA1P35221 906 aaKnown RBP13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 GRIA2P42262 883 aa13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 SLC6A11P48066 632 aa13.11□□□□□ -0.31
CDK2AP1-204ENST00000538446 MAPKAPK2P49137 400 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms